Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00317 ATGGGAAACCGCATCAGCTCCAAACACAAACCCTCTTCCGATTCTTCCCAAACTCATTCCAAATCACATTCCACTCCTCCTAATCAAACCCCCAAACAATCCACTCACACCTCCACCCCTTCCTCTTCCCCCCTCGGCCGCGTCTTAGGCAAGCCCATGGAAGACGTCCGATCAACCTACACCTTTGGCCGCGAACTTGGTCGCGGCCAATTCGGTGTAACCTACTTAGTCACACACAAACTCACCAAAGATCAATTCGCCTGCAAATCAATCGCCACTCGAAAACTCATCCGCCGCGATGATCTCGACGATATTCGCCGTGAAGTTCAGATCATGCATCATCTCACCGGTCACCGGAACATTGTTGAACTTAAAGGTGCTTATGAGGATCGTCATTCTGTTAATCTTATCATGGAGCTTTGTGCTGGTGGTGAGCTTTTTGATAGGATTATATCCAAAGGTCATTACTCTGAACGTGCTGCCTCGGAGTTGTGTCGCCAGATTGTCACTGTTGTTCATAATTGTCATACTATGGGTGTTATGCATAGAGATTTGAAGCCTGAGAATTTCTTGTTTCTTAGCAAGCATGAGAATTCACCACTTAAAGCTACCGATTTCGGTCTCTCCGTGTTTTTCAAGCCCGAAGATGTATTCAAAGATCTTGTTGGGAGTGCATATTATGTTGCTCCTGAGGTGTTGCGTAGAAGTTATGGACCTGAAGCTGATATTTGGAGTGCTGGGATTATTTTGTACATTCTCCTCTCTGGTGTTCCTCCCTTCTGGGCAGAAAATGAACAAGGTATCTTTGATGCTATTCTTCGTGGACATCTTGATTTCGCATCTGATCCTTGGCCTAAAATATCGAGTATTGCTAAAGATCTGATCAAAAAGATGTTGCGAGCTGACCCTAAAGAACGAATTTCAGCTGTTGAAGTCCTTGACCATCCTTGGATGAAAGAAGATGGAGCATCCGATAAGCCTCTCGATATTGCTGTCTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGCTAAAGAAAGTAGCTCTAAAGGTTATTGCTGAAAACCTTTCTGAAGAAGAAATTATAGGCTTGAAGGAAATGTTTAAATCCATGGATACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTAGGTACTAAGATTTCGGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTTGACGGAAATGGAACCATTGATTATATTGAATTTATAACAGCTACCATGCACTTGAATAGAATGGAAAGAGAGGACCACCTATACAAAGCTTTTGAATATTTTGACAACGACAAAAGCGGGTACATTACAAAAGAAGAGTTGGAATCTGCCCTTACAAAGTACAACATGGGTGATGAGAAAACAATAAAGGAGATTATTGACGAAGTTGATTCAGACAATGATGGAAGAATTAACTATGAGGAGTTTGTAGCCATGATGAGGAAAGGCAATCCAGACTTGATAACCAACAAACGTCGCAAATAA 1533 0.4247 MGNRISSKHKPSSDSSQTHSKSHSTPPNQTPKQSTHTSTPSSSPLGRVLGKPMEDVRSTYTFGRELGRGQFGVTYLVTHKLTKDQFACKSIATRKLIRRDDLDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIISKGHYSERAASELCRQIVTVVHNCHTMGVMHRDLKPENFLFLSKHENSPLKATDFGLSVFFKPEDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGIILYILLSGVPPFWAENEQGIFDAILRGHLDFASDPWPKISSIAKDLIKKMLRADPKERISAVEVLDHPWMKEDGASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKISESEVRQLMEAADVDGNGTIDYIEFITATMHLNRMEREDHLYKAFEYFDNDKSGYITKEELESALTKYNMGDEKTIKEIIDEVDSDNDGRINYEEFVAMMRKGNPDLITNKRRK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00317 510 Gene3D Transferase(Phosphotransferase) domain 1 146 325 - -
Mepo5g00317 510 Gene3D - 326 500 - -
Mepo5g00317 510 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 492 - -
Mepo5g00317 510 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Mepo5g00317 510 SUPERFAMILY EF-hand 356 497 IPR011992 -
Mepo5g00317 510 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Mepo5g00317 510 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Mepo5g00317 510 FunFam Calcium-dependent protein kinase 1 325 500 - -
Mepo5g00317 510 SMART efh_1 471 499 IPR002048 GO:0005509
Mepo5g00317 510 SMART efh_1 436 464 IPR002048 GO:0005509
Mepo5g00317 510 SMART efh_1 400 428 IPR002048 GO:0005509
Mepo5g00317 510 SMART efh_1 364 392 IPR002048 GO:0005509
Mepo5g00317 510 CDD STKc_CAMK 60 317 - -
Mepo5g00317 510 Gene3D Phosphorylase Kinase; domain 1 62 145 - -
Mepo5g00317 510 Pfam Protein kinase domain 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00317 510 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Mepo5g00317 510 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Mepo5g00317 510 SUPERFAMILY Protein kinase-like (PK-like) 57 329 IPR011009 -
Mepo5g00317 510 ProSiteProfiles Protein kinase domain profile. 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00317 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Mepo5g00317 510 MobiDBLite consensus disorder prediction 1 52 - -
Mepo5g00317 510 FunFam Calcium-dependent protein kinase 1 62 145 - -
Mepo5g00317 510 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Mepo5g00317 510 SMART serkin_6 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00317 510 Pfam EF-hand domain pair 435 497 IPR002048 GO:0005509
Mepo5g00317 510 Pfam EF-hand domain pair 365 425 IPR002048 GO:0005509
Mepo5g00317 510 MobiDBLite consensus disorder prediction 1 45 - -
Mepo5g00317 510 FunFam calcium-dependent protein kinase 1 146 325 - -
Mepo5g00317 510 ProSiteProfiles EF-hand calcium-binding domain profile. 432 466 IPR002048 GO:0005509
Mepo5g00317 510 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00317 Mepo-Chr5 2792399 2797980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00317 46 509 EF-hand Containing Proteins AT4G23650 80.000 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo5g00317 Pkinase 9.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00317 K13412 - gmx:100808536 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00317 5 2792399 2797980 Mepo2g04683 2 55195809 55201120 PCT