Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00308 ATGGGTTATTTTGTTCCAAACATTTTTCTGTTTTCAGTTTACTTGATTGGTTCGTTAGTATATCTAGGAAATGCTGAACCTGTTGAAGACAAAAATGCATTGTTAGAGTTTGTTCAAAAATTACCACCTTTTAAGCCTTTGAATTGGAATGTTAATTCTTCAATTTGTACTAGTTGGAATGGTGTAACTTGTAGTGAAGATAGGTCACAAATCATCGCGATTCGATTACCGGGGTTTGGATTTAATGGTACAATTCCTGCTAATACAATTAGTAAAATCAAAGGGTTGCAAAAATTGAGCCTTAGATCCAACAATATCATAGGTCCATTGCCAGATTTTGCTGTTTGGAAGAATTTATCTGTTGTTAATTTGTCTAATAACCGTTTCATTGGTGAAATTCCTTTATCTCTGTCCAATTTGAGTCACCTTACTTATTTGAATCTCGCAAACAATGCGCTTTCAGGTGAAGTTCCTAATATAAACTTGCCATTGTTGAAACAATTGAATTTGTCTAACAACAATTTACAAGGTGTTGTTCCTGTTTCTCTTCAAAGGTTTCCTAAGTCAGCATTTATTGGAAACAATGTTTCTATTGGTACATTGTCTCCAGTAACTCTACCGTGTTCGAAACATTGTTCTAAATCTGAGAAACATGGAAGGATTAGTGGAACAGTAATGTTGGGAATTATTGTTGTTGGTAGTTTTTTATGCCTTGCAGCATTCATTGTTTTTATCTTTGTGTTGTGTTCTAAAAAGAAGGATGGAGATGTTTTTGTTGGCAAGTTGGAGAAAGGAGGAAAAATGTCTCCTGAAAAAGTGGTCTCAAGAAACCAAGATGCAAACAATAAACTTTTTTTCTTTGAGGGATGTAACTATGCTTTTGATTTGGAGGATTTATTAAGGGCTTCTGCTGAGGTACTTGGTAAAGGAACATTTGGTGCTGCGTACAAGGCGGTACTCGAGGATGCAACCACAGTTGTTGTGAAGAGGTTAAAGGAGGTAGCTGTTGGGAAGAAGGATTTTGAGCAACACATGGATATTGTTGGAAGTCTTAAACATGAGAATGTGGTTGAGCTAAAGGCATATTACTATTCCAAAGATGAGAAACTGGTCGTCTATGACTATTTCAGTCAGGGTAGCATCTCTGCTTTGTTGCATGGTAAAAGAGGAGAGGACAGGGTGGCTGTAGATTGGAATACTCGGATCAAACTAGCTTTAGGTGCTGCACGAGGCCTTGCTCGTATCCATTCCGAAAATGGTGGAAAACTTGTACATGGCAATGTCAAATCCTCAAATATCTTTCTTAACACTAAGCAATACGGATGTGTATCTGATCTTGGCTTGGCAACCATAATGAGCTCAGTCGTCCAGCCCATCTCACGAGCATCCGGATACCGAGCACCAGAAGTTACAGACACCAGGAAAGCTACACAGCCTTCAGATGTTTATAGCTTTGGTGTGGTGTTACTAGAGCTTTTAACCGGTAAATCACCTATTCACACAACTAGAGGGGATGAGATTGTCCACCTTGTGAGATGGGTTCATTCAGTCGTGAGAGAGGAGTGGACAGCTGAAGTATTTGACTTAGAGCTTATGCGATGTCCTAATATAGAAGAAGAGATGGTAGAGATGTTACAGATAGCCATGTCATGTGTTGCAAGGATGCCTGATCAAAGACCTATGATGTCAGAAATTGTAAAGATGATAGAAAATGTAAGGCAGCTTGATATAGAGAATCGGCCATCATCTGAGAACCAAGCTGAAAGTGCAGCACAGCACCAACTCTCTCAACCTGAAAGTCCACCCCCTACCCAAGAAGGAGGTTATTTATAG 1833 0.3906 MGYFVPNIFLFSVYLIGSLVYLGNAEPVEDKNALLEFVQKLPPFKPLNWNVNSSICTSWNGVTCSEDRSQIIAIRLPGFGFNGTIPANTISKIKGLQKLSLRSNNIIGPLPDFAVWKNLSVVNLSNNRFIGEIPLSLSNLSHLTYLNLANNALSGEVPNINLPLLKQLNLSNNNLQGVVPVSLQRFPKSAFIGNNVSIGTLSPVTLPCSKHCSKSEKHGRISGTVMLGIIVVGSFLCLAAFIVFIFVLCSKKKDGDVFVGKLEKGGKMSPEKVVSRNQDANNKLFFFEGCNYAFDLEDLLRASAEVLGKGTFGAAYKAVLEDATTVVVKRLKEVAVGKKDFEQHMDIVGSLKHENVVELKAYYYSKDEKLVVYDYFSQGSISALLHGKRGEDRVAVDWNTRIKLALGAARGLARIHSENGGKLVHGNVKSSNIFLNTKQYGCVSDLGLATIMSSVVQPISRASGYRAPEVTDTRKATQPSDVYSFGVVLLELLTGKSPIHTTRGDEIVHLVRWVHSVVREEWTAEVFDLELMRCPNIEEEMVEMLQIAMSCVARMPDQRPMMSEIVKMIENVRQLDIENRPSSENQAESAAQHQLSQPESPPPTQEGGYL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00308 610 MobiDBLite consensus disorder prediction 578 603 - -
Mepo5g00308 610 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Mepo5g00308 610 PANTHER OS05G0588300 PROTEIN 15 583 - -
Mepo5g00308 610 Gene3D Ribonuclease Inhibitor 28 206 IPR032675 -
Mepo5g00308 610 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 376 583 - -
Mepo5g00308 610 ProSiteProfiles Protein kinase domain profile. 301 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00308 610 Gene3D Phosphorylase Kinase; domain 1 252 375 - -
Mepo5g00308 610 MobiDBLite consensus disorder prediction 578 610 - -
Mepo5g00308 610 FunFam pollen receptor-like kinase 1 270 375 - -
Mepo5g00308 610 SUPERFAMILY Protein kinase-like (PK-like) 305 569 IPR011009 -
Mepo5g00308 610 SUPERFAMILY L domain-like 40 189 - -
Mepo5g00308 610 Gene3D Transferase(Phosphotransferase) domain 1 376 596 - -
Mepo5g00308 610 Pfam Protein kinase domain 304 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00308 610 ProSitePatterns Protein kinases ATP-binding region signature. 307 338 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00308 Mepo-Chr5 2719821 2722236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00308 19 599 Receptor kinase-like Gene Family AT4G23740 58.360 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo5g00308 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00308 - - gmx:100804799 832.402