Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00288 ATGGGAGAACGTTCCCAAAATAAGGCAAATATCTCCCCAAACACAAGTCAAACCTCTGAAGAAGTGAGCAGCACTGAATGGGAGTTCATAGAGATGAGCGAGCAAGAAGAGGATCTCATTCGCAGGATGTACGACCTAGTTGGAGATAGGTGGAATTTGATAGCAGGTCGCATTCCAGGTCGTAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGCTGATGCTTTTTCAGCCAAAAGAAAGAAGTAA 255 0.4353 MGERSQNKANISPNTSQTSEEVSSTEWEFIEMSEQEEDLIRRMYDLVGDRWNLIAGRIPGRKAEEIERFWIMRHADAFSAKRKK 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00288 84 FunFam MYB-like transcription factor 31 73 - -
Mepo5g00288 84 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 31 72 - -
Mepo5g00288 84 Pfam Myb-like DNA-binding domain 32 71 IPR001005 -
Mepo5g00288 84 SUPERFAMILY Homeodomain-like 33 71 IPR009057 -
Mepo5g00288 84 CDD SANT 31 70 IPR001005 -
Mepo5g00288 84 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g00288 84 SMART sant 28 76 IPR001005 -
Mepo5g00288 84 Gene3D - 32 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00288 Mepo-Chr5 2558269 2559554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00288 32 70 MYB Transcription Factor Family AT5G52600 58.974 2.76e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g00288 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00288 K09422 - gmx:100814431 120.168