Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00255 ATGGGGTGCATTTGCTCAAAATACTCATCAAAGAAAGAAAAGGTTGAATTTGAGAAAGAAAGTGAGTGGAATAAATCTTCAGTGCAACTAGTTGCTCCTACACATTTAAATGGGGTTACCATTGGCATTGCCTTGGATGGTTGTAATTCAACACCGCGTTTGGCTAAGGCATCGTCACAAGTGTTTAGAAGAGCAGAAGAGAAAATCATTCAATTAAATGCTGCTAACAAGAGCCAGCATCAAAGATGTATGACATTAACTTCTGGCGTAGATGAAAGAAAGCCAGTAATGAGTAGAATACTCAGTGTGCAACATTTTTCAGGAGAACAACATGTTGATTCTGGATGGCCATTATGGTTGTCTTCAGTTGCAGGAGAAGCTATCAAAGGTTGGGTTCCTAGAAGGGCCGACTCTTTTGAAAAATTAGACCAAATTGGACAAGGGGCATATAGCAGTGTGCATAAAGCCCGTGATCTTGAAACTGGTAAATATGTGGCTTTGAAGAAAGTTAGGTTTTCAAGTGGGGATGTTGAAAGTGTACGTTTCATGGCAAGGGAAATCTATATTTTGCGTCAACTTGACCATCCTAACATCCTCAAACTCGAAGGTCTTGTCACATCTAGAACTTCAACTAGTTTGTACCTTGTTTTTGAATACATGGATCATGACCTTGCTGGACTAGCTGCTAGACCTGGCGTCAAGTTCACTGAACCACAGATAAAATGTTACATGAAGCAACTGCTATGTGGGCTAGAACATTGTCATAGCAGGGGTGTGTTGCACCGTGACATAAAGGGTTCAAATCTTCTAGTTGACAATAATGGAACTCTTAAGATTGGAGATTTTGGTCTTGCAACTGTATATGAACCTGATAGCAAGGTGCCATTGACAAGCCGAGTTGTGACACTTTGGTATAGGGCACCTGAACTTTTGCTAGGTTCTACTGACTATGGTGCTGCCATTGACCTGTGGAGTGCTGGTTGCATTCTGGCTGAATTGTTGGTGGGTAAGCCTATCATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCACCGTCTGAAGACTATTGGCAAAGAACAAAACTTCCATATGCAACAAGTTTTAAACCACAAAACTCTTACAGACGACAAGTTGCTGATGCATTTAAACACTTTCCTTCTACTGCATTGGCACTTGTTGATAAGCTTCTTTCAGTGGAACCACAAAAACGAGGATCTGCAACTTCTGCTCTTGAGAGTGAGTTCTTCACTACAGATCCTCTACCTTGTGATCCTTCAAGTCTACCAAAGTTTCCACCTAGCAAGGAGTTCGATGTCAAACGTCGAGATAAAGAAGCAACAAGAAAAAATACAGAAGCTGTTAAAGGACATGGGCCAGTAACTGCTTCAAGGGGAGCAAGAAATACCAAAGCATTGGAAACACCGGAGTATAATGCTCAAGGAGATATATCGTTGCCGGGAAAGTCAAATACGAGAATGTCCCCTCTTAAATATGAATCACAGGAAGATGAAGAGTCTAACAACAAGTGTGAACCAAGTAGATCACCTGTGCATAATGGCTATACACATTCTGCAATATCATTGCACAGTAAGAGATCAGATTCATCTAGGAAGAATATTCCAGAGTTAAGGACACAAAGGTCTCATTTGAATCAAGCAGCAATAGATTTCTCTGATTCTATTAAAAAGGAACAGGGCATGTCAGGCCGAGACACCGGAATGGGCTACATACCGAAGAAAAATAGAATCCATTGTTCTGGACCATTAATGCCAGCAGGCGGCAACATTGATGACATGCTTAGAGAGCATGAACGATTAATGCAAGATGTTTTTCGTAGTGTCAAAAAGGCTAATCCTTAA 1881 0.4104 MGCICSKYSSKKEKVEFEKESEWNKSSVQLVAPTHLNGVTIGIALDGCNSTPRLAKASSQVFRRAEEKIIQLNAANKSQHQRCMTLTSGVDERKPVMSRILSVQHFSGEQHVDSGWPLWLSSVAGEAIKGWVPRRADSFEKLDQIGQGAYSSVHKARDLETGKYVALKKVRFSSGDVESVRFMAREIYILRQLDHPNILKLEGLVTSRTSTSLYLVFEYMDHDLAGLAARPGVKFTEPQIKCYMKQLLCGLEHCHSRGVLHRDIKGSNLLVDNNGTLKIGDFGLATVYEPDSKVPLTSRVVTLWYRAPELLLGSTDYGAAIDLWSAGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKLPYATSFKPQNSYRRQVADAFKHFPSTALALVDKLLSVEPQKRGSATSALESEFFTTDPLPCDPSSLPKFPPSKEFDVKRRDKEATRKNTEAVKGHGPVTASRGARNTKALETPEYNAQGDISLPGKSNTRMSPLKYESQEDEESNNKCEPSRSPVHNGYTHSAISLHSKRSDSSRKNIPELRTQRSHLNQAAIDFSDSIKKEQGMSGRDTGMGYIPKKNRIHCSGPLMPAGGNIDDMLREHERLMQDVFRSVKKANP 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00255 626 MobiDBLite consensus disorder prediction 504 518 - -
Mepo5g00255 626 Gene3D Phosphorylase Kinase; domain 1 126 221 - -
Mepo5g00255 626 MobiDBLite consensus disorder prediction 519 536 - -
Mepo5g00255 626 FunFam probable serine/threonine-protein kinase At1g54610 222 463 - -
Mepo5g00255 626 MobiDBLite consensus disorder prediction 441 459 - -
Mepo5g00255 626 Gene3D Transferase(Phosphotransferase) domain 1 222 463 - -
Mepo5g00255 626 Pfam Protein kinase domain 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00255 626 SUPERFAMILY Protein kinase-like (PK-like) 132 431 IPR011009 -
Mepo5g00255 626 ProSiteProfiles Protein kinase domain profile. 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00255 626 CDD STKc_CDK9_like 139 423 - -
Mepo5g00255 626 MobiDBLite consensus disorder prediction 425 545 - -
Mepo5g00255 626 ProSitePatterns Protein kinases ATP-binding region signature. 145 168 IPR017441 GO:0005524
Mepo5g00255 626 SMART serkin_6 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00255 626 FunFam probable serine/threonine-protein kinase At1g54610 126 221 - -
Mepo5g00255 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Mepo5g00255 626 PANTHER CELL DIVISION PROTEIN KINASE 137 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00255 Mepo-Chr5 2220701 2225022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00255 131 471 Core Cell Cycle Gene Families AT5G10270 52.078 5.30e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo5g00255 Pkinase 9.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00255 K08819 - gmx:100791743 882.863