Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00249 ATGAATTGGTCTACTTCAACAACAAGCACAAGTGATGACAACAACAAGAAATTTAAGGGAGTTAGGCGTAGAAAGTGGGGAAAATGGGTATCAGAGATTCGTGTTCCGGGAAGTCAAGAACGTTTATGGTTGGGAACTTATGCTACACCGGAAGCTGCTGCAGTAGCACACGACGTAGCTTTTTATTGTTTAAAGAGACCTTCTACTTTGGACAAACTCAACTTTCCTGAGATTTTGTCTTCTTATTGTATTCAACAAAGAGATAATTTGATGTCTCCCAGGTCTGTTCAAAAGGTTGCTTCTGATGTTGCTATGGATGTTGATGCGCGAAACATTGCAAGTCAAGCAACAACTTTGCCAGAAATGAATCACATGGACAATGTTGTTGCTGATGATGTGTTTTGGTGGGATGGTTTGGGTGATGATCAAGGAGTTACTCAAGTTTTTAGTCAACAACATGAGGATTTGAACGTCTCCATTGATGATTATCTGTAG 495 0.4 MNWSTSTTSTSDDNNKKFKGVRRRKWGKWVSEIRVPGSQERLWLGTYATPEAAAVAHDVAFYCLKRPSTLDKLNFPEILSSYCIQQRDNLMSPRSVQKVASDVAMDVDARNIASQATTLPEMNHMDNVVADDVFWWDGLGDDQGVTQVFSQQHEDLNVSIDDYL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00249 164 SMART rav1_2 17 82 IPR001471 GO:0003700|GO:0006355
Mepo5g00249 164 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Mepo5g00249 164 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Mepo5g00249 164 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Mepo5g00249 164 Gene3D AP2/ERF domain 16 78 IPR036955 GO:0003700|GO:0006355
Mepo5g00249 164 CDD AP2 16 77 IPR001471 GO:0003700|GO:0006355
Mepo5g00249 164 ProSiteProfiles AP2/ERF domain profile. 17 76 IPR001471 GO:0003700|GO:0006355
Mepo5g00249 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 114 - -
Mepo5g00249 164 Pfam AP2 domain 17 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00249 Mepo-Chr5 2188481 2188975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00249 10 164 AP2-EREBP Transcription Factor Family AT1G22810 42.581 1.37e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo5g00249 AP2 9.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00249 - - mtr:11437172 311.612