LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g00240	ATGGGATTCTGGGGGATTGAAGTGAAACCTGGCAATCCGGTTCCGTATAGTACTGACGATGTGGAAGGAAAGCTTCACGTCACTCAGGCTACCCTAGGTGTTGGTCTATCAACGGAGAAAAGCATTCTTGAGTGCTCTTCTGGACGCAAAAATCCAGTTTTTTTGTGTTCCTTGCTGCCAAACAAGGTTGAGACGTGCCCTTTGAATCTTAAGTTCGATGAGGATGACTTGGTGGCATTCTCAGTCATTGGTTCCCGAAGCATCCATCTTTCTGGTTATTTCGTGCCAGATGAAGACGACACTAGAGATGACTATGAATATGATTCATTGGGAGAGGACGTGGGAACTGGGTCAGAGGAGTCATCTGAATATGATAGTGAAAATGGATACGATGATCACTTTTTTGATGACAGTGATATGGAAATGTACACATCTTCGCCTGTCCGGAGCAGTGGAGTCGTGATTGAGGAAATACCCGATGACAATCAGCCTGAAAATGGAGATAATCCAGCAAAGCAATCGAAGAAAAAGGAACAAACAGCTCACTTGAAAGAGAAATCCAGCAAAAGTTCTCAGCTTCCAGTTGTCATTAGAGGTGACAATAAGCTTGTCTTGGAAAGTGAAGATGAAGATGGTTTCCCGATTTCCACTTCAGACAAAGTTAAATCGGAGTCTCAGAAGGCAGAAACAGAAACAAAAGGAGAACAAGCCCACAAAAAAACTGGAAAATCCAATAAGAAGGCAAAAGATGTTGATGAGTCTGCTAGCTTAAAACGAAAAGTTCAAGCTGTCGTTGAGGATGAGCAGCTGCAAGATGGGAAAAAGAAGAAGAAGAAGAACAAGTTGAAAGATCATGGTAAGGAGGAAAGTGGTCATGTAAAGGAGACTAGTGTAACTGTGCCAGATGAAAAGCCTGAGGAGGTTAAAATTACTACCAACCAGAACAATGTCTCTCATGCAAAGGATGGAGATGATGGGAAACTATCCAATGACGAAGTCCTTGTTGAGAAGAAAAAAAAGAAGAAAAAGAAGAAAAAGACCGAAGAGGCTGAAGGAGAAGCTGCTAAGAATGAAATTGCTACAACTGTTGAAAGTCAGAAGTTGTCTACCTCTGAGAAAAAAGAGAAAGAACCAACTGAAGCCAAGCCATCTAACGTGAGAACCTATCCAAATGGATTGGTTATAGAGGACGTATCTATGGGCAAACCAGATGGCAAAAGAGCTGATCTTGGAAAGAAGGTCAGTGTTAAATATACTGGAAAGCTAAAAAAAGATGGGAAAATATTTGACTCGTGTGTTGGAAAAGCACCCTTTAAGTTTCGGCTTGGTGTAGGACAAGTCATCAAGGGGTGGGATGTTGGCGTCAATGGGATGAGGGTTGGGGACAAAAGAAGACTTACAATTCCACCATCTATGGGATACGGTGACAAACGTGTTGGGAGTATACCACAAAATTCATGGCTTGTATTTGATGTTGAGTTGGTTGGCGTTGAAGGCCGCTGA	1503	0.4238	MGFWGIEVKPGNPVPYSTDDVEGKLHVTQATLGVGLSTEKSILECSSGRKNPVFLCSLLPNKVETCPLNLKFDEDDLVAFSVIGSRSIHLSGYFVPDEDDTRDDYEYDSLGEDVGTGSEESSEYDSENGYDDHFFDDSDMEMYTSSPVRSSGVVIEEIPDDNQPENGDNPAKQSKKKEQTAHLKEKSSKSSQLPVVIRGDNKLVLESEDEDGFPISTSDKVKSESQKAETETKGEQAHKKTGKSNKKAKDVDESASLKRKVQAVVEDEQLQDGKKKKKKNKLKDHGKEESGHVKETSVTVPDEKPEEVKITTNQNNVSHAKDGDDGKLSNDEVLVEKKKKKKKKKKTEEAEGEAAKNEIATTVESQKLSTSEKKEKEPTEAKPSNVRTYPNGLVIEDVSMGKPDGKRADLGKKVSVKYTGKLKKDGKIFDSCVGKAPFKFRLGVGQVIKGWDVGVNGMRVGDKRRLTIPPSMGYGDKRVGSIPQNSWLVFDVELVGVEGR	500

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g00240	500	MobiDBLite	consensus disorder prediction	202	275	-	-
	Mepo5g00240	500	Gene3D	-	368	496	IPR046357	GO:0003755
	Mepo5g00240	500	MobiDBLite	consensus disorder prediction	320	337	-	-
	Mepo5g00240	500	MobiDBLite	consensus disorder prediction	368	382	-	-
	Mepo5g00240	500	SUPERFAMILY	FKBP-like	341	498	-	-
	Mepo5g00240	500	ProSiteProfiles	FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.	411	498	IPR001179	GO:0003755
	Mepo5g00240	500	Pfam	FKBP-type peptidyl-prolyl cis-trans isomerase	406	495	IPR001179	GO:0003755
	Mepo5g00240	500	FunFam	Peptidyl-prolyl cis-trans isomerase	386	499	-	-
	Mepo5g00240	500	MobiDBLite	consensus disorder prediction	170	185	-	-
	Mepo5g00240	500	Gene3D	Nucleoplasmin core domain	1	101	-	-
	Mepo5g00240	500	MobiDBLite	consensus disorder prediction	283	309	-	-
	Mepo5g00240	500	Coils	Coil	330	358	-	-
	Mepo5g00240	500	PANTHER	FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA	41	499	-	-
	Mepo5g00240	500	MobiDBLite	consensus disorder prediction	100	387	-	-
	Mepo5g00240	500	Pfam	Nucleoplasmin-like domain	3	95	IPR041232	-
	Mepo5g00240	500	PIRSF	FK506-bp_FPR3	283	498	IPR023566	GO:0003755
	Mepo5g00240	500	PIRSF	FK506-bp_FPR3	51	283	IPR023566	GO:0003755
	Mepo5g00240	500	PIRSF	FK506-bp_FPR3	197	334	IPR023566	GO:0003755
	Mepo5g00240	500	PIRSF	FK506-bp_FPR3	1	54	IPR023566	GO:0003755

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g00240	Mepo-Chr5	2119633	2124094	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g00240	411	495	Calmodulin-binding Proteins	AT3G25230	51.685	1.81e-16	80.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g00240	K14826		-	gmx:100792856	655.981