Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00237 ATGGAAGAATCAAACAACATGCAAGAGCAAGAACATGCAAATGTTGCTCCTCCAACATCCTATATAGGAGTTAGGAAAAGAAAATGGGGGAAATTTGTATCAGAAATAAGAGAGCCAGGGAAGAAAAGTAGAATATGGTTAGGAAGCTATGAAGAACCACAAATGGCAGCAGCTGCGTATGATATAGCAGCTTTTCACCTCAAAGGACACGCCGCGAAACTTAACTTTCCTGATATGATTGAGAAACTTCCAATGCCAGCAAGCTCCAAAGCAGAAGATATTCGTGTGGCAGCTCAACAAGGTGCATTGCAGTTCAAGAGGAGACCATCATCATCATCATCTGAAGGAGGTGTCAATAGCAATACTGGCAGTGTTGTTCCTGCTAGGGTTGGTCTTTCACCTTCTCAAATTCAAGCAATCAATGAGGCTCCTTTGGATTCACCTAAGATGTGGATGCAAATGTTTGGATTTCAATTTGATGAGTGTAGGAATTATGATAATAATGTTTTAGAGTTGAGTGAATGGGAAGAAATTCAGTATGAGTCATTGTGGGACTAA 558 0.405 MEESNNMQEQEHANVAPPTSYIGVRKRKWGKFVSEIREPGKKSRIWLGSYEEPQMAAAAYDIAAFHLKGHAAKLNFPDMIEKLPMPASSKAEDIRVAAQQGALQFKRRPSSSSSEGGVNSNTGSVVPARVGLSPSQIQAINEAPLDSPKMWMQMFGFQFDECRNYDNNVLELSEWEEIQYESLWD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00237 185 MobiDBLite consensus disorder prediction 1 15 - -
Mepo5g00237 185 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Mepo5g00237 185 MobiDBLite consensus disorder prediction 1 20 - -
Mepo5g00237 185 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Mepo5g00237 185 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Mepo5g00237 185 CDD AP2 21 78 IPR001471 GO:0003700|GO:0006355
Mepo5g00237 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 153 - -
Mepo5g00237 185 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Mepo5g00237 185 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Mepo5g00237 185 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Mepo5g00237 185 MobiDBLite consensus disorder prediction 104 124 - -
Mepo5g00237 185 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Mepo5g00237 185 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00237 Mepo-Chr5 2064136 2064861 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00237 1 185 AP2-EREBP Transcription Factor Family AT1G71450 45.263 7.70e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo5g00237 AP2 5.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00237 - - cam:101493379 273.478