Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00224 ATGAAAGAGCTCGAACATGATCCATCTTCAAACTCTAATTTCAACAAGCCTGTTGATTTTTTGAAACTATCTAAAGAGGATTCGATTCACATGTCCAAGGTATCAGAGCACAAATCTTTCAGCACTATGCAAGTTGGTTCATCATCTCGTTTTCCAAATAACAACAATAAAGGGGAAGATGAGAACAAGAATGAGGAGAAAAAAATGGATTCAAGGAGTTTTTCATGCTTATTTTGCAAGGGAAAATTTTCTACTTCGCAGGCGTTAGGTGGACACCAAAACGCTCATAAGGCAGAACGTGCATTACAAAAGCAACTAAAACAAAGGTATGAATTAGGTTTAGGGCAGCCTCTTCTTAACCCTTATTTTAGCTACCCAAACACTCTTTTTACACCCCTTAATTATGGGGCACTCGGTGTTAGAATGGAATCTATGATTCAAAAACCATCTTATATTAACCCTAGGATTGCCTCACATGGTTTTGGCCTTTTTGATAATAGTAAAGGTGATATGCATTTGAAAGATATATTAAATCCTTCTCTTGTTAGTTTGAGAAACATGGAGAGTAGTAATAGTAATTGTGGGGTTGGAATTCTAGGATTTGGTGGTGCAGCTACTTCAAGGATTGAAGATGGTGCACATAAAAGAATTAGTGGCCCTTTAGGGTATGATAATGGTGCTTTGTGTTTGAAAGATATGTTAAACCCTTCACTTGTTAGTTTGAGAAATATGAAGGGTAGCAATAGTAATAGTGGGGCTGGAATTCTAGGATTTGGTGGTGCAACTACTTCGAGGAATCAAGATGGTACGAATAACAAGATTGGTGCTATTATAAAATTTGGAGATTCTTCTACAAATGTTGCTACAAGTTCAAGCACAATCATAAACAACAAAAATAGCGAGGATCCAACTACTACCAAGGATAGTATTGATCTATCTAAGTTTAAGGTTGAAGAAGAATCCTGCAATTATGATTCGTGGGGGCTTGATCTATCACTTAGGCTTTAA 1008 0.3671 MKELEHDPSSNSNFNKPVDFLKLSKEDSIHMSKVSEHKSFSTMQVGSSSRFPNNNNKGEDENKNEEKKMDSRSFSCLFCKGKFSTSQALGGHQNAHKAERALQKQLKQRYELGLGQPLLNPYFSYPNTLFTPLNYGALGVRMESMIQKPSYINPRIASHGFGLFDNSKGDMHLKDILNPSLVSLRNMESSNSNCGVGILGFGGAATSRIEDGAHKRISGPLGYDNGALCLKDMLNPSLVSLRNMKGSNSNSGAGILGFGGATTSRNQDGTNNKIGAIIKFGDSSTNVATSSSTIINNKNSEDPTTTKDSIDLSKFKVEEESCNYDSWGLDLSLRL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00224 335 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 25 194 IPR044246 GO:0009788
Mepo5g00224 335 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Mepo5g00224 335 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Mepo5g00224 335 Gene3D Classic Zinc Finger 54 115 - -
Mepo5g00224 335 MobiDBLite consensus disorder prediction 35 55 - -
Mepo5g00224 335 MobiDBLite consensus disorder prediction 32 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00224 Mepo-Chr5 1986039 1987046 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00224 59 126 C2H2 Transcription Factor Family AT5G01860 52.941 4.41e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00224 - - tpra:123915384 296.204