Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00222 ATGAAGAAGATCGAACAAGATCCATCCTCAAACTCGAATTCCAACAAGCCTATTGATTCTGTGAAGGTATCAAAAGACGATTCGATTCGCGGATCAAAGGTGCCAAAGCACGGTTTTTTTAGCAATATACAAGTTGGTTCATCATCTTGTTTTTCTAAGAACAAGGAAGAAAAAAGCAAGAAAAACAATGACGAGAAAAATTTGGACTCAAGGTCTTTTTCATGTTTATTTTGCAAGAGAAAATTTCCTACTTCACAAGCGTTAGGAGGGCATCAAAATGCTCATAAGGCGGAACGTGCATTAAAAAAGCAACGTAGACTAAGGTATGATTTAGGTTTAGGACAACCTCACTTTAACCCTTATTTTAGTTACCCAAATAGCTTTTTTACATCCCCTTATTATCGAGAACTCGGTGTTAGAATGGAATCTATGATTCAAAAACCATCTTACATTAGCCCTAGAATTACCTCACATAGTTTTGGCCCTTTTGGGTATAATAATGGTGTTTTGGGTTTGCAAGAGATGTTAAACCCTTCTCTTGTTAGTTTGAGAAATATGGAGGGTAGTAATAATAATAGTGGAGTTGGGATTCTAGGTATTGGTGGTGGAACTACTTCAAGCACTTTTGGGCATAGTAATGGTGTTTTTGGTTTGCAAGAGATGTTAAACCCGTCTCTTGTTAGTTTGAAATATATGGAGGGTAGTAATAGTAATAGTGGAGTTGGGGTTCTAGGTATTGGTGGTGGAACTACATCAAGGATTGAAGATAGCACAAATAACAAAATTTGTGGCATTCTAAAGTGCGGAGATTCTTCCAAAAATGTTGCTTCAAGTTCAAACTCAATCATAGATAATAAAATCCCTAGGATTATCCCAAATGGTTTTGGTCATTTTGGGTATAATAATGGTGCTTTGTGTTTGCAAGAGACATTAAACCCTTCTCATACTGTTGTTAGTTTGAGAAATATGGAGAGTAGTTATAATGGGGCTGGAATTCTAGGTATTGGTGGTGGAACTACTTCAAGGATTGAAGATGACACAAATAATAAAATTGGTGCTATTTTTAAATGGGGAGATTCTTCTAAAAATGTTGCTACAAGTTCAAATGCAATCATAAACAATAAAAATATTGTGAATGCTACTACAACCAAGGATGATATTGATTTGTCGAAGTTCAAAGCTGAAGAAGAATCCTCCGGTTATGATTTGTGTGGGCTTGATTTGTCACTTAGGCTTTAA 1239 0.3584 MKKIEQDPSSNSNSNKPIDSVKVSKDDSIRGSKVPKHGFFSNIQVGSSSCFSKNKEEKSKKNNDEKNLDSRSFSCLFCKRKFPTSQALGGHQNAHKAERALKKQRRLRYDLGLGQPHFNPYFSYPNSFFTSPYYRELGVRMESMIQKPSYISPRITSHSFGPFGYNNGVLGLQEMLNPSLVSLRNMEGSNNNSGVGILGIGGGTTSSTFGHSNGVFGLQEMLNPSLVSLKYMEGSNSNSGVGVLGIGGGTTSRIEDSTNNKICGILKCGDSSKNVASSSNSIIDNKIPRIIPNGFGHFGYNNGALCLQETLNPSHTVVSLRNMESSYNGAGILGIGGGTTSRIEDDTNNKIGAIFKWGDSSKNVATSSNAIINNKNIVNATTTKDDIDLSKFKAEEESSGYDLCGLDLSLRL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00222 412 MobiDBLite consensus disorder prediction 1 42 - -
Mepo5g00222 412 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
Mepo5g00222 412 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 100 IPR013087 -
Mepo5g00222 412 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 195 IPR044246 GO:0009788
Mepo5g00222 412 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00222 Mepo-Chr5 1976205 1977443 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00222 70 195 C2H2 Transcription Factor Family AT5G01860 37.226 6.14e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00222 - - tpra:123915384 239.195