Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00197 ATGGGGACAAGAAATTTAGTATGGAATGTTACTAAAAAATTGGCCACAATTGGTCTCATTACTTTCACTGTCTCTGATCGTTATGCCACTGTTGTTCCTGTTCGTGGTGCTTCTATGGCTCCTACTTTCAATCCCGAATCTAATTCTTTCACAGATGATTATGTCTTTGTTGAGAAACTTTGCCTTGATAAGTTCAAGTTTTCGCACGGTGATATCGTCATTTTCAGTTCCCCGTCGAATTTTAAGGAGACACACATAAAGAGAATAATTGCATTACCTGGTGAGTGGTTTGTTAATCGTCATAACCAGGACGTACTGAAGGTTCCCGAAGGGCATTGTTGGGTTGAGGGAGACAATGCAGCCTCTAGCACGGATTCAAAATCATATGGACCTGTTCCATTGGGTCTAGTACGAGGAAGGGTTACCCATGTTGTTTGGCCTCCTCAAAGAATAGGAGCTGTTAAGAATACTACACCAGAAAGATTACCTTCTTCATAG 498 0.4137 MGTRNLVWNVTKKLATIGLITFTVSDRYATVVPVRGASMAPTFNPESNSFTDDYVFVEKLCLDKFKFSHGDIVIFSSPSNFKETHIKRIIALPGEWFVNRHNQDVLKVPEGHCWVEGDNAASSTDSKSYGPVPLGLVRGRVTHVVWPPQRIGAVKNTTPERLPSS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00197 165 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 160 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Mepo5g00197 165 Pfam Signal peptidase, peptidase S26 10 95 IPR019533 GO:0004252|GO:0006465
Mepo5g00197 165 Pfam Signal peptidase, peptidase S26 103 146 IPR019533 GO:0004252|GO:0006465
Mepo5g00197 165 SUPERFAMILY LexA/Signal peptidase 30 154 IPR036286 -
Mepo5g00197 165 Gene3D Umud Fragment, subunit A 27 160 - -
Mepo5g00197 165 CDD S26_SPase_I 31 141 IPR019533 GO:0004252|GO:0006465
Mepo5g00197 165 NCBIfam signal peptidase I 20 97 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo5g00197 165 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo5g00197 165 PRINTS Bacterial leader peptidase 1 (S26A) family signature 85 97 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo5g00197 165 PRINTS Bacterial leader peptidase 1 (S26A) family signature 108 127 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo5g00197 165 FunFam Mitochondrial inner membrane protease subunit 25 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00197 Mepo-Chr5 1809694 1812470 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00197 39 157 MADS-box Gene Family AT1G29960 36.800 8.99e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00197 K09648 - cave:132191989 252.677