Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00185 ATGTTGTCAGTAGCTCCTTCTGTTGATGCCAAACAGACCACCACAGAAGTATCTACTTCTGTTTCTGTACCTAAACTTGAACAAATTAACAACCAAAAACAAAAACCTTGTGATAATTTTGAGGATGATTCTCTTTCTACCCAAACTACTCATATATTTAAATCAAAATTACCAGATATACCTATCTCTAACCACCTCCCACTTCATACCTACTGCTTCCAAAACCTATCCGAATTTGCTGATCGGCCTTGTCTAATCGTCGCTGCCACCGGAAAAACCTATACCTACGCCGAAACCTATCTCCAATGTCGAAAAATCGCAGCTGGTTTGTCCAAATTAGGCATCCAGAAAGGTGATGTAATCATGATTCTTCTACAAAACTCAGCTGAATTTGTTCTCTCTTTCATCGCTGCTTCCATGATTGGCGCGGTCGCAACCACCGCCAATCCTTTCTACACCAGCGCTGAAATCTTCAAACAAATAAAAGCTTCTGAAACAAAACTCATTATTACACAAGCAATGTACGTTGAGAAACTCCATCAAAATGATCAGGTTGGTGTAGAATTTGACTTTAAGGTGATAACAACCGATGAACCACCTGTGAATTGTTTACATTTTTCGGTGATTTCTGAGTCGAACGAAGAGGATATTCCGGTGGTAGAGATCGATCCAGAAGACGCGGTGGCGCTGCCATTTTCTTCTGGAACAACAGGATTACCTAAAGGAGTGATTCTAACACACAAGAGTTTAACAACAAGTGTGGCACAACAAGTGGATGGAGAGAATCCAAATCTATATTTAACAACAGAAGATGTTCTTCTTTGTGTTCTTCCATTGTTTCATATATTTTCTCTCAACAGTGTGTTATTGTGTGCACTGAGAGCAGGAAGTGGGGTTTTGTTGATGCATAAATTTGAGATAGGGGCTTTGCTTGGTCTTATACAGAAACATAAGGTGACGGTGGCGATGGTTGTTCCGCCGTTGGTTTTGGCGTTGGCAAAGAGTCCGGCGGTGGCGGAGTTTGATCTGAGTTCAATAAGGTTGGTTTTGTCTGGTGCTGCACCGTTAGGGAAGGAGCTTGAAGAAACTCTTCATAATAGAATTCCTCAAGCTGTTTTGGGACAGGGTTATGGTATGACAGAGGCAGGCCCAGTACTGTCCATGTCTTTGGGCTTTGCAAAGAACCCATTCCCAACAAGTTCAGGCTCATGTGGCACTGTTGTAAGAAATGCAGAGCTCAAAGTTCTTGATCCTGAAACTGGTCGTTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATACGTGGCCAACAAATCATGAAAGGATATTTGAATGATGAGAATGCAACAAAAACTACTATTGATGAGGAGGGTTGGCTTCATACCGGTGATGTTGGCTATATAGATGACAATGATGAGATTTTCATAATTGACAGAGTGAAAGAACTCATCAAATTCAAAGGCTTCCAAGTGCCCCCTGCTGAGCTTGAAGGTCTTCTTGTAAGTCATCCATCTATTGCAGATGCAGCTGTTGTCCCGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCCTTTGTGGTAAGGTCAAATGGAAATGATCTAACTGAAGAGATTGTAAAGGAGTTTATAGCTAAACAGGTGGTATTTTATAAAAGACTGCACAAAGTATATTTTGTTCATGCAATTCCAAAGTCTCCTGCAGGAAAGATATTGAGGAAAGACCTGAGAGCAAAGCTAGAAAGCTCCACCTAA 1755 0.4137 MLSVAPSVDAKQTTTEVSTSVSVPKLEQINNQKQKPCDNFEDDSLSTQTTHIFKSKLPDIPISNHLPLHTYCFQNLSEFADRPCLIVAATGKTYTYAETYLQCRKIAAGLSKLGIQKGDVIMILLQNSAEFVLSFIAASMIGAVATTANPFYTSAEIFKQIKASETKLIITQAMYVEKLHQNDQVGVEFDFKVITTDEPPVNCLHFSVISESNEEDIPVVEIDPEDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMHKFEIGALLGLIQKHKVTVAMVVPPLVLALAKSPAVAEFDLSSIRLVLSGAAPLGKELEETLHNRIPQAVLGQGYGMTEAGPVLSMSLGFAKNPFPTSSGSCGTVVRNAELKVLDPETGRSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDNDEIFIIDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEIVKEFIAKQVVFYKRLHKVYFVHAIPKSPAGKILRKDLRAKLESST 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00185 584 FunFam 4-coumarate--CoA ligase 2 482 583 - -
Mepo5g00185 584 Gene3D - 481 583 IPR045851 -
Mepo5g00185 584 Gene3D - 43 480 IPR042099 -
Mepo5g00185 584 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 48 578 - -
Mepo5g00185 584 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
Mepo5g00185 584 Pfam AMP-binding enzyme C-terminal domain 495 570 IPR025110 -
Mepo5g00185 584 CDD 4CL 62 576 - -
Mepo5g00185 584 SUPERFAMILY Acetyl-CoA synthetase-like 60 581 - -
Mepo5g00185 584 FunFam Long-chain-fatty-acid--CoA ligase FadD 54 481 - -
Mepo5g00185 584 Pfam AMP-binding enzyme 75 486 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00185 Mepo-Chr5 1670133 1675592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00185 32 493 Monolignol Biosynthesis Gene Families AT1G65060 69.936 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00185 K01904 - gmx:547492 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00185 5 1670133 1675592 Mepo5g00185 5 1670133 1675592 ECH