Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00184 ATGAGGAGCAGCTGGCTCAATTTAGGCAAGCACAGGGTCAAGATCCCTCCCACACTAGAGCGCCGGAGAGTACGGCAGGCTGAACGGTATAATTGGGCTGCAACAAGGGGTGTTCCTGATAAAATGGTTCTGGAAAATTTGCCAGAAGATCTCCAGAAAGACATAAGACGCCATCTCTTCAAATTTGTTAAAAAAGTTCGAATCTTTTCCCTGATGGATGAGGATGAACCTATCTTAGACGCCATTCGTGAGAGACTAATACAGACGACATACATTAAAGGCAGTAGAATTCTGAGTCAGGGTGGTCTCGTACAGAAGATGGTGTTTATTGTGCGTGGAAAGTTAGAGAGCATCGGAGAAGATGGAATTCCGGTTCCACTATCAGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTCTTGAAAGCAAAGAAGGTAAAAAAGTAAAGCTTCAAGGACAAGGATTGACTAGTGACAGAACAGTAAGATGCTTAACCAATGTTGAGGCATTTTCACTCCGCGCTAAAGACATTGAAGAAGTCACAACTCTTTTCACAAGATTCTTGCGGAGCCCTCGTGTTCAAGGAGTTATAAGGTATGAATCGACGTATTGGAGATCACTTGCAGCAAATAGAATTCGGGTTGCATGGAGATACAGAAAGAAGCGTCTAAGTCGAGCTCATACCACACAAAATGATTATCAAACATTGATGTCATAG 735 0.4299 MRSSWLNLGKHRVKIPPTLERRRVRQAERYNWAATRGVPDKMVLENLPEDLQKDIRRHLFKFVKKVRIFSLMDEDEPILDAIRERLIQTTYIKGSRILSQGGLVQKMVFIVRGKLESIGEDGIPVPLSEGDACGEELLRWYLEQSLESKEGKKVKLQGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFTRFLRSPRVQGVIRYESTYWRSLAANRIRVAWRYRKKRLSRAHTTQNDYQTLMS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00184 244 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 20 233 - -
Mepo5g00184 244 Coils Coil 244 244 - -
Mepo5g00184 244 ProSiteProfiles cAMP/cGMP binding motif profile. 70 138 IPR000595 -
Mepo5g00184 244 Gene3D Jelly Rolls 66 192 IPR014710 -
Mepo5g00184 244 CDD CAP_ED 68 186 IPR000595 -
Mepo5g00184 244 Gene3D Helix hairpin bin 10 60 - -
Mepo5g00184 244 SUPERFAMILY cAMP-binding domain-like 16 190 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00184 Mepo-Chr5 1663222 1665494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00184 21 145 Ion Channels AT3G17700 73.600 2.49e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00184 K05391 - mtr:11411638 341.273