Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00183 ATGGAACAGGATCAATGTTGGATTCAAACAAAGAGAAAGTACTCAATGAGTAATTCCAATCTTGCTAGTTCACTAACTAACCCTTCTTCTTCTTGTTATGGTGATTCATGGGAAGAACAAGCTTTTGCTGAAGATGCAGCTGCTGGGTCACTTGGGGGGTGTATATGGCCACCAAGATCATATTCTTGTAGCTTTTGTAGAAGAGAGTTTAGGTCAGCACAAGCATTAGGTGGACATATGAATGTTCATAGAAAAGATAGAGCAAGACTCAAACAACAACCACAAAATGATCAGATTCTTTATCATAATCATCATCATCACCATCATCACGAGCTTGAAATTGCAACTCATCATGTTCAAAACCCAGTTATTCAAAATGTTTATAATAATAACCTGTTCCCTAATATGTAG 411 0.3698 MEQDQCWIQTKRKYSMSNSNLASSLTNPSSSCYGDSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQQPQNDQILYHNHHHHHHHELEIATHHVQNPVIQNVYNNNLFPNM 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00183 136 SUPERFAMILY beta-beta-alpha zinc fingers 58 88 IPR036236 -
Mepo5g00183 136 Gene3D Classic Zinc Finger 58 121 - -
Mepo5g00183 136 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Mepo5g00183 136 SMART c2h2final6 61 83 IPR013087 -
Mepo5g00183 136 Pfam C2H2-type zinc finger 61 85 - -
Mepo5g00183 136 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Mepo5g00183 136 PANTHER OS07G0101800 PROTEIN 33 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00183 Mepo-Chr5 1661368 1661778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00183 28 101 C2H2 Transcription Factor Family AT2G37740 71.622 7.46e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00183 - - cam:101506400 182.57