LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g00176	ATGGCAACAATACCATATATGGATATTCTAAGTTATATACTTATGTTCTTGTTAATATTCATTGTTACACAAGTTTTTTACTCACTATTTGCATCCAAAATGAGAAACAAAACAAACTCAAAACTTCCACCAGGACCTTTCCCTCTTCCTATAGTTGGAAACCTCTTTGTAATGAACAATAAACCACATAAATCATTAGCCAAACTTGCCAAAATTTATGGTCCAATATTAAGTTTAAAGCTAGGCCAAGTAACAACCATAGTTATCTCTTCGCCCGATATGGCCAAAGAGATACTCCAAACACATGATTCTTTACTTTCAGACCGAACCGTACCACATGCTTTAACTGCTTTCAACCACGACCAATTCGGCGTGGGATTCCTTTCTCTTTCGCCTCTTTGGCGAGAGATGCGAAGGGTGTGCAAAAATCAACTATTCTCTAATAAGAGTCTTGATGCAAGCCAATATCTTAGGCGTGGGAAGATAGATGAACTCATCAATTATGTTTCTCAATGCAGCCTAAAGGGTGAAGCAATAGATATGGGAAAGTTAGCTTTTACGACTTCAATTAATTTGTTGTCTAATACTGTTTTCTCCGTAGACTTTGCTAATAACAAGGATTTGGTTATGGATATGTCGGAGACGGTTGGATCTCCAAACATGGCTGATTTTTTTCCATTGTTGAGGTTGATTGATCCACAAGGCATCAAAAGGACCTATGTGTTTTATGTAGGAAAGTTGTTTGGTATCTTCGACAACATAATCGATCAAAAGTTGAAATTGCGAGAAGGGGATGGTTTTGTCACCAACAACGATATGTTAGACTCGTTGCTCGCTGAAGAAAACAAAAATGAGTTGGACAGAGAAAAAATTCAACACTTACTACATGATCTACTTGTTGGAGGAACTGATACAACTACATATACATTAGAATGGGCAATGGCTGAACTACTTCACAACCCAAATGTAATGTCAAAGGTTAAAAAAGAACTGGAAGAAACCATTGGAATAGGAAATCCAATTGAGGAATCAGACGTTACTAGACTCCCTTACTTGCAAGCAATAATAAAAGAGACCTTACGCTTGCACCCGATAGCTCCACTTTTGCTCCCTCGAAAAGCAAAGGAAGATGTAGAACTCAATGGCTACCTCATTCCAAAAGGTGCACAAATCTTTGTTAATGTGTGGGCTATTGGTAGAGACCCAAAAGTATGGGACAATCCAAATTTATTTTCGCCGGAGAGGTTTTTAGGAACAAAGCTTGATATCAAGGGACAAAATTTTCAGCTCACGCCGTTTGGCAGTGGAAGGCGAATTTGTCCCGGCTTGCCTTTGGCTATGAGGATGTTGCACATGATGTTGGGATCATTACTAATTTCTTTTGATTGGAAGCTAGAAAATGGTATGAAACCTGAAGAAATAGACATGGAAGATGCAATACAAGGACTTGCCTTGAGAAAATGTGAATCCTTGAGAGTTATTCCAACCAAAATCAGTAATTGA	1503	0.3826	MATIPYMDILSYILMFLLIFIVTQVFYSLFASKMRNKTNSKLPPGPFPLPIVGNLFVMNNKPHKSLAKLAKIYGPILSLKLGQVTTIVISSPDMAKEILQTHDSLLSDRTVPHALTAFNHDQFGVGFLSLSPLWREMRRVCKNQLFSNKSLDASQYLRRGKIDELINYVSQCSLKGEAIDMGKLAFTTSINLLSNTVFSVDFANNKDLVMDMSETVGSPNMADFFPLLRLIDPQGIKRTYVFYVGKLFGIFDNIIDQKLKLREGDGFVTNNDMLDSLLAEENKNELDREKIQHLLHDLLVGGTDTTTYTLEWAMAELLHNPNVMSKVKKELEETIGIGNPIEESDVTRLPYLQAIIKETLRLHPIAPLLLPRKAKEDVELNGYLIPKGAQIFVNVWAIGRDPKVWDNPNLFSPERFLGTKLDIKGQNFQLTPFGSGRRICPGLPLAMRMLHMMLGSLLISFDWKLENGMKPEEIDMEDAIQGLALRKCESLRVIPTKISN	500

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g00176	500	CDD	CYP76-like	70	495	-	-
	Mepo5g00176	500	PANTHER	CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED	19	497	-	-
	Mepo5g00176	500	Gene3D	Cytochrome P450	28	493	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo5g00176	500	PRINTS	E-class P450 group I signature	310	336	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo5g00176	500	PRINTS	E-class P450 group I signature	70	89	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo5g00176	500	PRINTS	E-class P450 group I signature	440	463	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo5g00176	500	PRINTS	E-class P450 group I signature	394	418	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo5g00176	500	PRINTS	E-class P450 group I signature	430	440	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo5g00176	500	PRINTS	E-class P450 group I signature	188	206	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo5g00176	500	PRINTS	E-class P450 group I signature	290	307	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g00176	Mepo-Chr5	1598165	1600142	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g00176	7	497	Cytochrome P450	AT2G45550	44.008	4.11e-159	460

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g00176	-		-	cave:132173603	584.719

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