Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00158 ATGGGGGGTGGAGAAGGTGTAGTTGGAGTGAGAGGTCTGAATGAAGAAGAAATCAAGTGGCCACCATGGTTGCAACCACTTCTCCAAACAAGGTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCACTTTGTTCTTCTTGTCTAGCTTCTCACAAAGATCATAGAGATATCCAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTATCTGAGATACAGAAATTTTTGGACATAACAGGGGTTCAAACATACGTTATAAACAGTGCAAAAATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGTGTCACCAATATTTGCCATGTCTGTGAACGAAGCCTTCTAGATTCATTCACCTACTGCTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGCAATTCCACAAGAAGAAAAAGTTAAGTGAGAGAGATGGGTCAGATGGTGAAGAATCAAATAGTAATGAAAATGACATAAACATAAACAAAATTCAGAGCTTCACACCTTCAACACCGCCACCTTACAAAATTGCTAAGAGGAGGAAGGGAGTCCCACATAGAGCTCCAATAGGGGGAGGCCTTATTTACTGA 648 0.4105 MGGGEGVVGVRGLNEEEIKWPPWLQPLLQTRFFVQCKVHADSNKSECNMYCLDCMNGALCSSCLASHKDHRDIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKIVFLNERPQPRPGKGVTNICHVCERSLLDSFTYCSLGCKIVGTSKQFHKKKKLSERDGSDGEESNSNENDININKIQSFTPSTPPPYKIAKRRKGVPHRAPIGGGLIY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00158 215 MobiDBLite consensus disorder prediction 156 170 - -
Mepo5g00158 215 MobiDBLite consensus disorder prediction 156 215 - -
Mepo5g00158 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 209 - -
Mepo5g00158 215 MobiDBLite consensus disorder prediction 172 191 - -
Mepo5g00158 215 Pfam PLATZ transcription factor 76 147 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00158 Mepo-Chr5 1445046 1447417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mepo5g00158 PLATZ 9.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00158 - - gmx:100792668 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02712 2 36894674 36897026 Mepo5g00158 5 1445046 1447417 ECH
Mepo5g00158 5 1445046 1447417 Mepo5g00158 5 1445046 1447417 ECH