Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00137 ATGAGTACTGTCGGATACAGATCAGAAGATGAATGCTCTGTCATAGGGGAAAAGGCTGAAATCGGATTTCTAGATTTTGAGGAAGAGAGATCTGTTTGCAGTTATGTTGCTGATGACGGGGCTCCAGTAATCGTATCTGTCCCGTTTGCTTTTAAGAATGGGAAGCCTCAATCAGTATCTGTTGGAGATACTGCCGTGGAGTTAATAACCATTAATAATACTACCGAGGAACCAGTGGACCTGTGGAGTGTTCATATTTTTGCCTCAAACCCTCCGGACTCTTTCACTCTTTCTCTCACGGAGCCTCCACCGGCAAATTCAAATGCTGAGAACTTTATAGAATCTTTCAGAGTGGAGGACAGGATGCTTCAGCCTGGTGAGATCTTAAAGATATGGTTGTCTTGCAAGACAAAAGACATGGGCATGTACTCATCTGTTGTGTATTTTGACGTTGGAGATGAGAAAATTGAAAGGGTGGTTTTCCTCTTGGTTGAAGACAAGATCTCAAAATCTCTGGCTTCTAACAGACCTTACTCTAGAGGAAGGAAGAAAGACAAATTTGTTGTAGAGGCCTTTGTTCCCGGCACACGCCCTGTAGCGAAGTCAAATCGAAAATACATAAATAGGCTTCCAAGATATGAGGTTCCCAAGGATATTAGGCTCTTACTTGAGGGCAATCAGGTCCCTCAAGTCGTTGAAGATGGTCTTACAAGACGAAGTTATGCGTCTTATTTCAAAACACTAATAATAATGGAAGAGATACAATTAGAGGATGATATGAGGACTTATGACATGGAATGTGTAACTATGAGAAGGAGAGGAAATAATTTTTTGTCCTTGGAGGTGCCTGGGCTTGCTGAGAGAAGGCCATCACTGGTGCATGGAGATTATATCTTTGCCAAGCTGGTTACTGAGCAAGAACAAGATGCTGCACCTGTTTATCAGGGATTTATTCACCGGGTTGAAGCTGATGAGGTCTATTTGAAGTTTGATCCGGAATTTCACCATTACCATAGAGATGAAGATCTCTATAATGTCCACTTCACATATAATAGGATCAATATGAGAAGGTTATATCAAGCTGTTGAAGCAGCAGAAAACTTAGGTGCTGAGTTTCTTTTTCCATCTACTTCATCCAAAAGAAGGTGCATTAAAACCACTGATCTGGTTCCCATATCTGGTTCTTTAAATGAGGAGCAAACGTGTTCGATCAAAATGATTCTGGGTTGCAGAGGCGCACCACCTTATGTGATTCATGGGCCTCCAGGTACAGGGAAGACTAGGACAATAGTGGAAGCAATCCTCCAGCTCTACCAACATCATAAGAATACTCGTATTCTTGTCTGTGCCCCCTCAAACAGTGCAGCAGACCACATACTGGAGAAACTCCTTGCTGAGAAGGATATTGAATTTCGAGAAAATGAAGTATTTAGGCTCAATGCCACTGCCAGGCCATATGAAGATGTAAAACCTGAATTTCTTCGCTTTTGCTTCTTCGACGAGATGATATTTAAGTGTCCCCCGGTCAGTGCCCTCAATCATTATAGGATTGTGGTATCCACATATATGAGTGCCTCTCTTCTTTTTGCAGAAGATGTTAACCGTGGTCACTTCTCTCATATTTTCTTGGATGAGGCTGGCCAAGCTTCAGAACCTGAAACCATGATTCCTATAGCCCATCTCTGCAGAAGGGACACTGTTGTTGTTCTGGCTGGAGACCCCTTGCAGTTGGGCCCAGTAATATTTTCCAAGAAAGCAGATGAGTACAAATTGGGGGTTTCTTTCCTGGAACGATTGTTTAAATGTGAGTTATATGGCAGTGGAGATGCCAATTATATAACGAAACTGGTTAGAAACTATCGATGTCACCCAGAGATTCTATACCTCCCTTCAAAGCTGTTCTATTTTGGGGAATTGATGGCGTGTAGAGATCCCACAACTTTCACGGTGACTGCAGAATTTCTCCCTAATAAGGAGTTTCCTGTTCTTTTCTTTGGTATCCAAGGATGTGATGAAAGAGAAGGGAATAACCCATCATGGTTCAACCGAATCGAAGTAAGCAAGGTTGTAGAAACCGTTAGGAAGCTGATAAATGGTGGTAAAATAAGAGAGGAAGACATTGGCATTATAACACCATATAGACAACAAGTGCTGAAAATAAAACAGACACTTGAAAATCTAGGAATGCCTGATGTCAAAGTTGGCAGTGTTGAGCAATTCCAAGGACAAGAGAAGGAGGTCATCATTGTATCAACTGTTCGATCAACCATCAAACATAATGAGTTTGACAGAATCCACTGTCTTGGCTTTTTGAGCAATCATAGAAGGTTTAATGTGGCTATAACCCGTGCTATATCGTTGCTGGTTATAATTGGGAACCCTCATATTATATGCAAGGATGATCATTGGAGCCAAATGCTGTGGCACTGTGTGGACAATTCATCCTATCTGGGTTGTTCTCTTCCAGAAAGGATAGAACATTATGATGAGGACGTTGGAGAGAACTCTGGCTTTGGCTTCGATGAAGGTAACACACGGCCCTCAAACAATATAGAAGGTGGTCAAGATTCCTACCAGTCAGAGTTCCCTAAACCTGATGAAACTGGATGGTCTGATGGCTGGAACCCATTTCCCTCAAACAATGTAGAATCTGGTCAAGATGGCTGGAACACATTGCCCTCTAACAATGGAGAATCTGGTCAAGATGGATGGAGCACATTGCCCTCTAACAATGTAGAAGCTGGTCAAGATTCCTTCCAGTCAGACCTCCCTAAACCTGTCACTGATGAAGCTGAATGGTCTGATGGTTGGAAGTAG 2817 0.4239 MSTVGYRSEDECSVIGEKAEIGFLDFEEERSVCSYVADDGAPVIVSVPFAFKNGKPQSVSVGDTAVELITINNTTEEPVDLWSVHIFASNPPDSFTLSLTEPPPANSNAENFIESFRVEDRMLQPGEILKIWLSCKTKDMGMYSSVVYFDVGDEKIERVVFLLVEDKISKSLASNRPYSRGRKKDKFVVEAFVPGTRPVAKSNRKYINRLPRYEVPKDIRLLLEGNQVPQVVEDGLTRRSYASYFKTLIIMEEIQLEDDMRTYDMECVTMRRRGNNFLSLEVPGLAERRPSLVHGDYIFAKLVTEQEQDAAPVYQGFIHRVEADEVYLKFDPEFHHYHRDEDLYNVHFTYNRINMRRLYQAVEAAENLGAEFLFPSTSSKRRCIKTTDLVPISGSLNEEQTCSIKMILGCRGAPPYVIHGPPGTGKTRTIVEAILQLYQHHKNTRILVCAPSNSAADHILEKLLAEKDIEFRENEVFRLNATARPYEDVKPEFLRFCFFDEMIFKCPPVSALNHYRIVVSTYMSASLLFAEDVNRGHFSHIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQLGPVIFSKKADEYKLGVSFLERLFKCELYGSGDANYITKLVRNYRCHPEILYLPSKLFYFGELMACRDPTTFTVTAEFLPNKEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVVETVRKLINGGKIREEDIGIITPYRQQVLKIKQTLENLGMPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRAISLLVIIGNPHIICKDDHWSQMLWHCVDNSSYLGCSLPERIEHYDEDVGENSGFGFDEGNTRPSNNIEGGQDSYQSEFPKPDETGWSDGWNPFPSNNVESGQDGWNTLPSNNGESGQDGWSTLPSNNVEAGQDSFQSDLPKPVTDEAEWSDGWK 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00137 938 FunFam Probable RNA helicase SDE3 345 490 - -
Mepo5g00137 938 MobiDBLite consensus disorder prediction 873 923 - -
Mepo5g00137 938 CDD SF1_C_Upf1 622 810 IPR047187 -
Mepo5g00137 938 MobiDBLite consensus disorder prediction 832 938 - -
Mepo5g00137 938 MobiDBLite consensus disorder prediction 841 864 - -
Mepo5g00137 938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 806 IPR027417 -
Mepo5g00137 938 Gene3D - 621 822 IPR027417 -
Mepo5g00137 938 SMART ultradead3 392 592 IPR014001 -
Mepo5g00137 938 Pfam AAA domain 592 794 IPR041679 -
Mepo5g00137 938 PANTHER CANCER/TESTIS ANTIGEN 55 119 379 - -
Mepo5g00137 938 Gene3D - 508 605 IPR027417 -
Mepo5g00137 938 Gene3D - 324 504 IPR027417 -
Mepo5g00137 938 CDD DEXXQc_Helz-like 395 621 IPR026122 GO:0003723|GO:0032574
Mepo5g00137 938 Pfam AAA domain 396 495 IPR041677 GO:0004386
Mepo5g00137 938 Pfam AAA domain 511 584 IPR041677 GO:0004386
Mepo5g00137 938 FunFam Probable RNA helicase SDE3 621 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00137 Mepo-Chr5 1298089 1302468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00137 395 552 Core DNA Replication Machinery Family AT1G08840 32.515 2.49e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00137 K18422 - gmx:100801796 1438.32