Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00120 ATGAAGAACTTCTTCAAGGTGAAAAAGAAAACTTTGAATAAGCCATCCAAATCAAATAAGAAATCCCGTGTCACCACTAAATCCCAAGATGGTCGTGAATACAATAGGGAAGAGATGATGTTGCGGCAATTTGACATGGATACAAAGTATGGACCATGTTTTGGCACATTGGTACACTTTCCCACTGTCAGACCAATCACATTTGAAAGTGATGCAGACTCATGCTTATATGCAGATGTACTCATCACACAGGCAGCAATGTATCAGAATTACATGGAGCAGATCCCAATCCTGACTAGTCGAGGCTCAGTCATTCCATATACCTTATGGATAGGATTAGGCAAATCAATTAAGAATATAGACAACCTCTTCATTACCTCAAATATTATCCTTAAGCAATGGGACCAAATGAGAATTGGCAATGAGGATGAGTATAGGCGCTTAGACAACATAATCCATCGCCAAGCATCATCGCATTTTCATCTTTGCTAA 492 0.3923 MKNFFKVKKKTLNKPSKSNKKSRVTTKSQDGREYNREEMMLRQFDMDTKYGPCFGTLVHFPTVRPITFESDADSCLYADVLITQAAMYQNYMEQIPILTSRGSVIPYTLWIGLGKSIKNIDNLFITSNIILKQWDQMRIGNEDEYRRLDNIIHRQASSHFHLC 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00120 163 Gene3D RDM1 protein domain 79 161 IPR036319 -
Mepo5g00120 163 Pfam RNA-directed DNA methylation 1 81 155 IPR015270 GO:0005634|GO:0044030
Mepo5g00120 163 SUPERFAMILY Hypothetical protein At3g22680 81 155 IPR036319 -
Mepo5g00120 163 PANTHER PROTEIN RDM1 11 155 IPR015270 GO:0005634|GO:0044030
Mepo5g00120 163 MobiDBLite consensus disorder prediction 11 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00120 Mepo-Chr5 1151783 1152855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00120 33 55 Core DNA Replication Machinery Family AT1G09815 65.217 5.78e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00120 - - mtr:11441094 123.635