Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00114 ATGAATATCAATATCAATATGGATACACCTACACCAGAGAGGAACCAGATCAACACCACTCTCTCTAAGTTCGAGGATTCACCAGTATTCAACTATATCAACAATTTATCTCCTATAAAGCCAGTTAAATCTGCTCACATTACTCAGACTTTCAATTCACTTAGCTTTTCATCCCCTCCATCCGTTTTCGCGTCCCCTCATGTCACCTCCCTCAAGGAATCTAGATTCCTACGCAGACATAACCAGCCAGAAGAATCGAAGGCTAAAGATTCATCTGAAGATGTAAATAAATTGTACTCAAATGAAGGGGCTATTGAAGAGCCTACTCTTTCTCGTCATAACTTGAGGGAATTGCACGAAAGTACTGAACAACTGATTTCAGTAGGAGATGTTTCTATTGAGCTATCTAACGAAGAAACGAATTTTACCGATGAGCTACCTCAATCATTACAGTATAATTGTGGCAGTCCTGGTTATGATCCTGCACTTTGTGGTGATGAGGATAACACACTTTTGGAATTGTCTGGTGAAGCCGTATCGGATGATGCATATGCTCAGGAAGCTTGTGTAACAGATTCAGTTGAGGCTGAATTGCATCTTCAAGGAACAAGTCAGATCGATCAAAAGGGTGAAAGTTCAGACTGTGATTGGGATGGTTTAATTCCCAATTCTGCTAATATGTTAATTGAAGCAGAAGCTTTTAAGGGTCTGATGCAGAAACCATCTGGCTCTCCTATACGACTCAGCGATTTTGTCCCCCTGCTACAACAATGTACCAGGAATGATGATCACAAGATTTACATGGTTGATTCAGTTGCTTCTAGTTCTCAACATGAAATTGAAAATCATTGTTCCGAGCTAGTAGCCGCAACCGACACTGACCGTACACAGGACAATCTTGCTAATGGTTCTTCGATGACCAGCAATTCAAATGAGAAAATGGATAATGAGCTTGTTTCTGTCACACACCGTGGTATTCGGAGGCGCTGTCTTGACTTTGAGATGGCCAGTGTGCGAAGGAAGATCGCAGATGATAATTCAAACACCAACTCTAGTACACCACAGTCTGAAATAATGAATGCTGCTAATGAAAACCAATTGCTCCCTGCAAAACGCAACGCAAATTCACAAAGGTGCATTTTGCCGGGTATCGGTTTACACTTGAATGCACTTGCTACCGTAAAGGATCACAAAGGCAAACAAATTGAAAATTTGACTTCTGGAAGACAACTCAGCCTGACCAGCTCGACATCATTGCTACTCTCTGCATGCCAAGAACATCAGCATCTATCGGTCGTATCTGTATCAATATCATCTGAAAGAGAATTGGACCCATCTGACAATGGGGTTCAGCCTACTGAAGATTTTCCCCAGCCAATAGCTTACATGGCTACTGAAGATTTCAATCAGAATAGCCCCAAAAAGAAAAGGCGTAAGTCAGAGCCAGTCGGAGAAATTGAGGGCTGCAAACGTTGTAATTGCAAGAAATCAAAGTGCTTGAAGCTTTATTGCGAGTGTTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCCTGTCAGGAATGCTTCAACAAACCTATCCATGAAGATACTGTTCTTCAAACTCGCAAGCAAATTGAATCTCGCAACCCTCTTGCATTTGCTCCTAAAGTCATCCGAAGTGCTGACTCTGTGCCTGAAACTGGGATTGACCCAAACAAAACTCCAGCTTCAGCACGCCATAAAAGAGGATGCAACTGTAAAAAATCAAACTGCCTAAAGAAATATTGTGAATGCTATCAGGGTGGTGTTGGTTGCTCTATTAGCTGCAGATGTGAAGGGTGCAAGAACGCATTTGGTAGAAAGGATGGTTCTGCTTCTATGGGGATAGAAGGTGAGACAGAAGAAGAAACAGAAACTAGTGACAAGGGTGTGGAGGAAAAAGCTATTCAAAAAACTGAAATTCAGAATATCGAAGATCATCCTGATTCTGCTGGGGTCTCAACACCTTTACGGCTTTCCAGTTCTTGCAACAGGTCATTGCTTCCGATGCCCTTTTCATCAAAGGGAAAGCCACCAAGATCTTTTGTTACAACCCTCACTGGTTCTGGATATTTGGCCAGTCAAAAGCTTGCAAAACCAAATTCTCTTTGGTCTCAATCTAAGACTTTTCAGACTGTTCCAGACGATGAAATGCCAGAAATTCTCCGTGGTGGTGATAGCTCTCCTATCGCATGCATCAAAACTTCATCTCCAAATGGCAAAAGGATCTCTTCACCTAACTGTGAAATGGGATCGTCTCCTAGTCGCAGAGGTGGCAGAAAGTTGATATTACAATCTATTCCATCGTTTCCTTCTCTCACACACCACCCTTAG 2355 0.4229 MNININMDTPTPERNQINTTLSKFEDSPVFNYINNLSPIKPVKSAHITQTFNSLSFSSPPSVFASPHVTSLKESRFLRRHNQPEESKAKDSSEDVNKLYSNEGAIEEPTLSRHNLRELHESTEQLISVGDVSIELSNEETNFTDELPQSLQYNCGSPGYDPALCGDEDNTLLELSGEAVSDDAYAQEACVTDSVEAELHLQGTSQIDQKGESSDCDWDGLIPNSANMLIEAEAFKGLMQKPSGSPIRLSDFVPLLQQCTRNDDHKIYMVDSVASSSQHEIENHCSELVAATDTDRTQDNLANGSSMTSNSNEKMDNELVSVTHRGIRRRCLDFEMASVRRKIADDNSNTNSSTPQSEIMNAANENQLLPAKRNANSQRCILPGIGLHLNALATVKDHKGKQIENLTSGRQLSLTSSTSLLLSACQEHQHLSVVSVSISSERELDPSDNGVQPTEDFPQPIAYMATEDFNQNSPKKKRRKSEPVGEIEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSADSVPETGIDPNKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSASMGIEGETEEETETSDKGVEEKAIQKTEIQNIEDHPDSAGVSTPLRLSSSCNRSLLPMPFSSKGKPPRSFVTTLTGSGYLASQKLAKPNSLWSQSKTFQTVPDDEMPEILRGGDSSPIACIKTSSPNGKRISSPNCEMGSSPSRRGGRKLILQSIPSFPSLTHHP 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00114 784 ProSiteProfiles CRC domain profile. 488 613 IPR005172 -
Mepo5g00114 784 MobiDBLite consensus disorder prediction 292 312 - -
Mepo5g00114 784 MobiDBLite consensus disorder prediction 741 784 - -
Mepo5g00114 784 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 7 781 IPR044522 GO:0003700
Mepo5g00114 784 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 490 525 IPR005172 -
Mepo5g00114 784 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 576 611 IPR005172 -
Mepo5g00114 784 MobiDBLite consensus disorder prediction 741 759 - -
Mepo5g00114 784 SMART CXC_2 573 614 IPR033467 -
Mepo5g00114 784 SMART CXC_2 487 528 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00114 Mepo-Chr5 1110948 1115794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00114 16 780 CPP Transcription Factor Family AT3G22780 42.947 2.01e-157 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mepo5g00114 TCR 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00114 - - mtr:11423771 1441.79