Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00091 ATGGATCGGTCCTACATCAACCTGCATGTGAGTCATGAACCAATCTTACTTAACTCAAAAGACATTCCTTCTTTGGGGGGTTGGTTCTTAATTAATTTTGATTTCACCCACATAATTTTACCTTCGGATCACGATGCCACAACCCCAATGTCCAACTCTGCAATTACAATGAACAAAATCTTGGCAGTCCCTATTGAAATCTTATGTAATTGTACGGAGGGAGATCATAACAATGTCTTGTTCTTGTATGACACCTTTGATTTTGTGCCTACGAACATATTAGATGTGATTCTACCTAATATGGAGGAATGTGCTAGACAAATGGTCCTAGAGTATAGTGAAGGACGTGACATATTAGAGGTGAATATGTCGCTTCATGTTGACACAATAGAAACGGTAGAAGAGGAAGAGGATGATAGAAATTTAGATGATAATGGTCAACAAGCTCAACAAATTGTGGGTTTGTTGGAGAAATTAGAAAATAATCATCGTTCTTCAGATTTAATAGGACAATGTTCAATTTGCTTGGAAGAGTTTTGCACTAAGTCGGAACTTGTTTATACAAAATGCTCACACGTTTTTCATCAAAAATGCATCGGTCCATGGATCCAAAAATGCATCAACCGTTCCTCATCTTATTCTTGTCCTTTGTGTAGAGGAAAGGGGGGTTGTGGTGGTCGTGGAGGGGTAATAGAATGGGGTTTCAACGGTGTTGTTGCACTCATGAGAGTCATAGCCAACAACGAGAAAGATGAGAACAAGGATAGTGTGCGGAACATTCCTGCTTGTAACCAGCAGTGCAAATTCAAGACATATATTCCCAAAAAATGGAATATTTACAGAAAACATGAACGGTTTGGTGAGCTGTGA 870 0.3897 MDRSYINLHVSHEPILLNSKDIPSLGGWFLINFDFTHIILPSDHDATTPMSNSAITMNKILAVPIEILCNCTEGDHNNVLFLYDTFDFVPTNILDVILPNMEECARQMVLEYSEGRDILEVNMSLHVDTIETVEEEEDDRNLDDNGQQAQQIVGLLEKLENNHRSSDLIGQCSICLEEFCTKSELVYTKCSHVFHQKCIGPWIQKCINRSSSYSCPLCRGKGGCGGRGGVIEWGFNGVVALMRVIANNEKDENKDSVRNIPACNQQCKFKTYIPKKWNIYRKHERFGEL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00091 289 Pfam Ring finger domain 171 219 IPR001841 -
Mepo5g00091 289 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 135 219 - -
Mepo5g00091 289 ProSiteProfiles Zinc finger RING-type profile. 172 219 IPR001841 -
Mepo5g00091 289 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 222 IPR013083 -
Mepo5g00091 289 SUPERFAMILY RING/U-box 171 220 - -
Mepo5g00091 289 SMART ring_2 172 218 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00091 Mepo-Chr5 956165 959566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00091 171 219 C3H Transcription Factor Family AT3G58720 40.816 2.18e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00091 - - psat:127102848 218.394