Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00086 ATGATTGTATCTCAGTCTCAAGGAGGCATGTTTCAAGGTTATATTCCATTGGATCAAGAAGATGTGTCTAAAGGGTGTCGTCCAAAAACTGTAATCAATTATTGTAGTGGACCTTCAATGATGAATTTTGAGCTGCATGTGTTTGATGACACTGATTTTCAATTTTATCCTGATTTTGCTCTCATTAATGATGTTGATTTGGAAGGTTGTAAGAAGTTTGTAATGGATGATTGCAATATCATTGCTGCTACTTATAATTCTTCAACTTCAACATGTGCTAAGAAGAGAATGCCGTTGCTGAATGCTAGAAATAGTTCATCTTCCAAGGGACAAAAGGCACTTCTCAAAGTTCCTTATAGTAATAATGAGTCCAACACATTTGGAGTTTCAAAGAACAAGAGTTTTAATGTGAGAGTTTTTTTGAAGGTTATGGTTGCAATTACTGCAACTCTTGCATGCTTCTTTGGAGCTCTTGCTGCTTATTATCATCCTTTTGTAAAGAGACTAATAACAAGAAGAAAGAAGTATCTAAATGCAACAGCTATTGGAATCAACTTTAGAGAATTCACATTCCAAGAGCTGCATGAAGCAACAGATGGATTGAGTAGGATTCTTGGCAAGGGATCTTCAGGGAAAGTCTACCACGGTACTTTGATTATAGATGACGTGGAAATTGGTATTGCAGTGAAGAAGCTTGAAAAGAAGATTGAGAAAAGTGAGAATGAGTTCATGACTGAGCTCAAAATTATAGGTCTTACACATCACAAAAATTTGATGAAACTTTTGGGATTTTGCATGGAGGATAACCATAGACTACTTGTCTATGAGCTAATGCCAAACGGAGCGTTGTCAAGTTTATTGTTTGGAAAAGGAGAGAGACCTCAATGGAGTCAAAGGGTTGAAATGGCTCTTGGAATAGCAAGAGGCTTACTCTACTTGCATGAAGAGTGTGAAACACAGATCATACATTGTGATATCAAGCCACAAAATGTATTACTTAATGCTAATCATATTGCAAAGATTTCAGATTTTGGACTTTCCAAGCTTTTGAACAAAGATCAAACCAGAACAAGTACAAATTTTAGAGGGACAATAGGGTACATAGCACCTGAATGGTTAAGGAGTGCACCAATAACTGCAAAAGTTGATGTTTTCAGCTTTGGAGTTATGCTACTTGAGATCATTTGTTGTAGGAGGCATGTTGAGTCATATCAGAATCATGATGAGGATGAAAGAGGAAGTGAAGATGATGATTTGGTTCTTGTTAATTTGGTTTTAAGGTGCATGGTTACCAGGAAACTAGAGATAGTGGTAAGTCATGACTTAGAAGTACTCAATGATTTCAAAAGGTTTGAGCAAGTGGCTTTGGTTGGATTATGGTGTCTTCATCCAAACCCAACTCTTAGACCTTCAATGAAGAAAGTGACTCAAATGCTAGAGGGAACAGTGGAAGTTGGGATTCCGCCTTTGCTTTATGATCAGATGATGGCAAATCATAACTCTTATAGTTTGTGA 1515 0.369 MIVSQSQGGMFQGYIPLDQEDVSKGCRPKTVINYCSGPSMMNFELHVFDDTDFQFYPDFALINDVDLEGCKKFVMDDCNIIAATYNSSTSTCAKKRMPLLNARNSSSSKGQKALLKVPYSNNESNTFGVSKNKSFNVRVFLKVMVAITATLACFFGALAAYYHPFVKRLITRRKKYLNATAIGINFREFTFQELHEATDGLSRILGKGSSGKVYHGTLIIDDVEIGIAVKKLEKKIEKSENEFMTELKIIGLTHHKNLMKLLGFCMEDNHRLLVYELMPNGALSSLLFGKGERPQWSQRVEMALGIARGLLYLHEECETQIIHCDIKPQNVLLNANHIAKISDFGLSKLLNKDQTRTSTNFRGTIGYIAPEWLRSAPITAKVDVFSFGVMLLEIICCRRHVESYQNHDEDERGSEDDDLVLVNLVLRCMVTRKLEIVVSHDLEVLNDFKRFEQVALVGLWCLHPNPTLRPSMKKVTQMLEGTVEVGIPPLLYDQMMANHNSYSL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00086 504 ProSitePatterns Protein kinases ATP-binding region signature. 205 231 IPR017441 GO:0005524
Mepo5g00086 504 Pfam Protein kinase domain 203 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00086 504 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 489 - -
Mepo5g00086 504 FunFam S-receptor-like serine/threonine-protein kinase 169 277 - -
Mepo5g00086 504 Coils Coil 229 249 - -
Mepo5g00086 504 Gene3D Transferase(Phosphotransferase) domain 1 278 485 - -
Mepo5g00086 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
Mepo5g00086 504 ProSiteProfiles Protein kinase domain profile. 199 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00086 504 SMART serkin_6 199 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00086 504 SUPERFAMILY Protein kinase-like (PK-like) 186 490 IPR011009 -
Mepo5g00086 504 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 278 486 - -
Mepo5g00086 504 Gene3D Phosphorylase Kinase; domain 1 173 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00086 Mepo-Chr5 914051 915565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00086 185 484 Receptor kinase-like Gene Family AT5G45780 40.000 2.03e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo5g00086 Pkinase 7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00086 - - lang:109330973 785.793