Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00074 ATGGAGCTTCTACCATCATCAGAGAAGAAAGGCCAGAAAAGAAAACTGGAACAACACGAAGAACGATTCCAACAAGACACACAGATCTCCCTTCCTCTCACCGGAGACGCTCGCGACGCCGTTCTCTCCGACGTCAATCAACACGTTTCAATTCTCCTTTCATCTTTCTCATCCAACGAATTCGATAGAGCTTCCGCTAAACGCGCCACTCACGCTCTCGCCGATCTTGCCAAAAACGAGGAAATTGTGAATGTCATTGTTGAAGGAGGTGCTGTTCCGTCTTTGATTAAGCATCTTCAACCACCGACTCAAAATGATTCTATTCAGAAGCCGTTGCCTTTTGAACACGAGGTTGAGAAAGGGAGTGCTTTCGCACTTGGACTTCTTGCTGTCAAGCCAGAACATCAACAGCTCATTGTAGACAGTGGTGCCTTGAAGCATCTTGTTGATCTTTTGAAGAGACATAAGAATGGACTAACATCACGTGCCATTAATAGTCTCATTCGGAGGGCTGCAGATGCGATCACTAATCTTGCTCACGAGAACAGCAGTATTAAAACCCGTGTCAGGACGGAAGGTGGGATTCCACCATTAGTTCATTTGCTTGAATTTGCGGATACAAAAGTGCAAAGAGCAGCTGCTGGTGCATTACGAACCCTGGCTTTTAAAAATGATGAAAACAAGAATCAGATTGTTGAATGCAACGCTCTTCCAACTCTGATTTTGATGCTTCGGTCAGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATCGGAAATCTGGTCCACTCATCCCCCAATATAAAGAAAGAAGTTATTCTTGCTGGAGCCTTGCAACCTGTTATTGGATTACTTAGCTCCTGTTGCTCTGAAAGCCAGAGGGAAGCAGCATTGTTACTTGGACAGTTTGCAGCGACTGATTCAGACTGCAAGGTTCACATTGTACAGAGAGGTGCTGTACGACCTTTGATAGAGATGCTTCAGTCTTCAGATGTTCAGCTCAAAGAAATGTCTGCTTTTGCATTGGGGAGATTGGCACAGGACACACATAACCAAGCTGGTATTGCACACTCTGGCGGATTAGTGCCACTACTGAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGAGAATGAGGATAATGTGCCCGACTTTATTAGGGTCGGTGGAATTAAGAGACTTCAGGATGGAGAGTTTATAATCCAAGCAACTAAGGATTGTGTTGCTAAGACATTGAAAAGACTAGAAGAGAAGATTAATGGTCGTGTGCTGAACCATTTGTTATATCTTATGAGAGTTTCTGAAAAGGCATTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTCTGCAGATGACCAGAAAAATATATTTATTGACCACAATGGGCTGGAGTTGCTTATTGGACTTCTTGGCTCATCTTGCCCTAAGCAGCAACATGATGGTGCTGTGGCTTTATTCAAGTTGGCTAACAAAGCTATGGCTCTGTCTCCTGTAGATGCTGCTCCTCCATCCCCAACACCGCAGGTCTATTTGGGGGAGCAGTATGTAAACAATGCCACCCTTTCCGACGTTACGTTTTTGGTTGAAGGTAAACTGTTTCATGCTCATAGAATCTGTTTACTTGCATCTTCAGATGCATTTCGTGCGATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAGGGACATTGAGATTCCAAATATTAGATGGGAGGTCTTTGAGCTTATGATGAGGTTTATCTATACTGGATCGGTTGATGTCACTCTTGAAATTGCTCAAGATCTTCTCCGAGCAGCTGATCAATATCTCTTGGAAGGGCTTAAGAGACTATGTGAATACACGATTGCACAGCATGTATCACTCGAGAACGTGTCAAGTATGTATGAACTTTCAGAAGCCTTCAATGCTACATCATTGAGACACACATGCATCCTTTTTATCTTGGGGCACTTCGATAAATTAAGTGAAACGCCAGGGAACTCTGATTTAATTCAGCGTACAATACCTGATATCCGCAATTACTTTGTTAATGCTCTTACAAAGGGGAACTCCAACATCCAGGCATAG 2109 0.4348 MELLPSSEKKGQKRKLEQHEERFQQDTQISLPLTGDARDAVLSDVNQHVSILLSSFSSNEFDRASAKRATHALADLAKNEEIVNVIVEGGAVPSLIKHLQPPTQNDSIQKPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALKHLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRTEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVILAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSSDVQLKEMSAFALGRLAQDTHNQAGIAHSGGLVPLLKLLDSKNGSLQHNAAFALYGLAENEDNVPDFIRVGGIKRLQDGEFIIQATKDCVAKTLKRLEEKINGRVLNHLLYLMRVSEKAFQRRVALALAHLCSADDQKNIFIDHNGLELLIGLLGSSCPKQQHDGAVALFKLANKAMALSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKLFHAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLEIAQDLLRAADQYLLEGLKRLCEYTIAQHVSLENVSSMYELSEAFNATSLRHTCILFILGHFDKLSETPGNSDLIQRTIPDIRNYFVNALTKGNSNIQA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00074 702 CDD BTB_POZ_ARIA_plant 523 638 - -
Mepo5g00074 702 ProSiteProfiles BTB domain profile. 536 603 IPR000210 GO:0005515
Mepo5g00074 702 Pfam Armadillo/beta-catenin-like repeat 189 221 IPR000225 GO:0005515
Mepo5g00074 702 Pfam Armadillo/beta-catenin-like repeat 224 263 IPR000225 GO:0005515
Mepo5g00074 702 Pfam Armadillo/beta-catenin-like repeat 308 347 IPR000225 GO:0005515
Mepo5g00074 702 SUPERFAMILY ARM repeat 62 502 IPR016024 -
Mepo5g00074 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 193 228 IPR000225 GO:0005515
Mepo5g00074 702 MobiDBLite consensus disorder prediction 1 29 - -
Mepo5g00074 702 Gene3D - 40 203 IPR011989 -
Mepo5g00074 702 Pfam BTB/POZ domain 529 631 IPR000210 GO:0005515
Mepo5g00074 702 MobiDBLite consensus disorder prediction 1 24 - -
Mepo5g00074 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 90 144 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 79 131 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 349 389 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 308 348 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 266 306 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 224 264 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 182 222 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 132 180 IPR000225 GO:0005515
Mepo5g00074 702 SMART arm_5 464 504 IPR000225 GO:0005515
Mepo5g00074 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 143 193 IPR000225 GO:0005515
Mepo5g00074 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 319 361 IPR000225 GO:0005515
Mepo5g00074 702 Gene3D - 205 408 IPR011989 -
Mepo5g00074 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 235 277 IPR000225 GO:0005515
Mepo5g00074 702 SMART BTB_4 536 633 IPR000210 GO:0005515
Mepo5g00074 702 SUPERFAMILY POZ domain 528 631 IPR011333 -
Mepo5g00074 702 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 6 700 IPR044282 -
Mepo5g00074 702 Gene3D - 414 513 IPR011989 -
Mepo5g00074 702 Gene3D Potassium Channel Kv1.1; Chain A 517 664 IPR011333 -
Mepo5g00074 702 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 360 402 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00074 Mepo-Chr5 780345 789201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00074 195 413 U-box Gene Family AT3G46510 28.448 3.33e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo5g00074 BTB 1.1e-25 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00074 - - gmx:100812456 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00074 5 780345 789201 Mepo5g00074 5 780345 789201 ECH
Mepo5g00074 5 780345 789201 Mepo4g04425 4 54074531 54083342 PCT