Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00062 ATGTTTAATACTCCACATCAAAATCACGACAACAAGAACATGTATCAGAATAGGATGACAAGAACAAGAGAAGAAGCAAACCAAATGAACGTGGAGGCTCCTTCAAGTGATGGCCAACAATCCAACCAACGTCCCAGAAAAAGGACCTATCGCCGCCACACACAGCAACAAATTGATGAAATGGATACTTTCTTCAAGCAGTGTCCTAACCCTAACGATGCTCAGAGAAGAGAGTTGAGCCTCCGGACTGGATTAGACCCAACCCAAATCAAGTTTTGGTTTCAGAACAGGCGCACTTCGCTGAAGGTTCAAACTGATCGAGGTGAGAATGAGCTATTAAAGATTGAGAATGAAAAACTTCGAGATGAACTTAATAGATACAAGGGGACAATTGTTACCACATGCAAAGTATGTGGAAGTTCCACTACCGCTGGGGAAATGTCACATGACGATCAGCAGCTAAGACTGGAGAATGCTCTCTTAAGGAAAGAGCTTGAAAGGTTTATGGGCGAGACGCCAACAGATCCTGCAGACTCTCGTGCCAATATAACATCATCCAACAATAGCACTCATGTTGCTTCACGCTCTGTCGATTTTGGAGTTGCCGGTGGTAGCAATGGAGCACGCCACCGCATGGTAGGAGAGGCTTTCAGCGTTGGTGGCTCCTCAGTACAGATTCAGGGTCTTAATGAGAAGCGAAGGATTATAGAGCTTGCTGTTGTTGGAATGGATGAACTGACCAAATTGGCTAGGACATATGGACCCCCTCTTTGGCTTCCCACCAATCATGTCACTGAGATTCTGAATGGAGAGGAATACATGAAGTATTTCCCAAGGGTTAATGGTCCCAACACGTTTGGATTAAGGCTTGAGGGATCAAAAGAATCTGTGGTGGTCATGATTAATGCTCCTGATCTTGTAGATATCCTCATGGATGTGAATCAATGGTCAAATATGTTTTGCGGCATTGTTTCTAGAGCAGCAACACTTGAAGTCCTTTCAACTGGAGTGGGAGGTAACTACGATGGAGCCTTGCAAGTGATGACAGCTGAATTTCAAGTCCCCTCCCCACATGTTCCTACTCGTCAAAACCATTTTGTGAGATACTGTAAACTGCATCCAGATGGAATATGGGTAGTGGCTGACGTGTCCTTGCATCTGTTAAATGCAACATCTGCTAGTAGTAGTAGTAGTACTGCTTCAAGAACCCAAAGAAGACCCTCTGGTTGTTTGATTGAGACACTCCCAAATGGTCTCACTAAGGTTACATGGATTGAAAATGTAGAAGTTGATGATCAGGTGGTGCAAAATATATATATACCTCTAGTTAATTCTGGACTTGCTTTTGGAGCTAAACGCTGGGTAGCTACATTACATCGACAAAGCGATCGTCTTGTTTTTAGAACAGCCACCAACGTTCCACAGGAACATCATGTGAAATTGACTCCGGAGGGAAAGAAAAGTATATTGAATCTTGCGGAAAGGTTGGTAGCTAGCTTTAGTACAAGTATTGGTTCTTCTACAGCACATGCTTGGACAAAGGTACCTGGAAATGGACCGGAGGTTGTAATGGTCATGACGAAAAGATATATCGATGAATCGAGCATTGACAAACCTGTCAGTGTAGTGCTCAGTGCTGCTACTTCTTTTTGGCTTCCAGTTCCTCCAAGGAGGGTGTTTGATTTTCTTCGAGATCAAAACACAAGAAAACATTGGGATATTCTCTCCGCGGGCGGTATAGTTCATGAATTGGCTCACATTTCAAATGGTCGTGATTCTGGAAACTATGTCTCCTTATTTCGTATCACTAGTGAAAATTCAGAGCAGAGTGATGTGGTAGTACTGCAAGAGAATTGCACTGATGTAACTGGGTCATATGTAGTATATGCGCCTGTGCAAATCCCTACAATGCATGAAATCCTGAATGGCGGCGACTCAAGTCGTCTTACTCTGCTTCCCTCCGGATTCGCTATTTTTCCAGATGGGGGTATAACAAATGGAGGACCAATTATGAATGTTGGATCTGGAGGGTCTCTTGTCACAGTTGCATTTCAGATTATAGTTGATTCTATTCCACATGCAAGGCTAGCTCTGGGTTCAATCACCACTGTTAACACTTTGATCAAGAACACTGTGGAAAGGATTAAAACTGCAGTGATGCCTAATGGCATCTAA 2175 0.4345 MFNTPHQNHDNKNMYQNRMTRTREEANQMNVEAPSSDGQQSNQRPRKRTYRRHTQQQIDEMDTFFKQCPNPNDAQRRELSLRTGLDPTQIKFWFQNRRTSLKVQTDRGENELLKIENEKLRDELNRYKGTIVTTCKVCGSSTTAGEMSHDDQQLRLENALLRKELERFMGETPTDPADSRANITSSNNSTHVASRSVDFGVAGGSNGARHRMVGEAFSVGGSSVQIQGLNEKRRIIELAVVGMDELTKLARTYGPPLWLPTNHVTEILNGEEYMKYFPRVNGPNTFGLRLEGSKESVVVMINAPDLVDILMDVNQWSNMFCGIVSRAATLEVLSTGVGGNYDGALQVMTAEFQVPSPHVPTRQNHFVRYCKLHPDGIWVVADVSLHLLNATSASSSSSTASRTQRRPSGCLIETLPNGLTKVTWIENVEVDDQVVQNIYIPLVNSGLAFGAKRWVATLHRQSDRLVFRTATNVPQEHHVKLTPEGKKSILNLAERLVASFSTSIGSSTAHAWTKVPGNGPEVVMVMTKRYIDESSIDKPVSVVLSAATSFWLPVPPRRVFDFLRDQNTRKHWDILSAGGIVHELAHISNGRDSGNYVSLFRITSENSEQSDVVVLQENCTDVTGSYVVYAPVQIPTMHEILNGGDSSRLTLLPSGFAIFPDGGITNGGPIMNVGSGGSLVTVAFQIIVDSIPHARLALGSITTVNTLIKNTVERIKTAVMPNGI 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00062 724 CDD homeodomain 45 104 IPR001356 GO:0003677
Mepo5g00062 724 MobiDBLite consensus disorder prediction 170 189 - -
Mepo5g00062 724 Pfam Homeodomain 47 99 IPR001356 GO:0003677
Mepo5g00062 724 SUPERFAMILY Bet v1-like 238 463 - -
Mepo5g00062 724 SUPERFAMILY Bet v1-like 482 716 - -
Mepo5g00062 724 MobiDBLite consensus disorder prediction 29 43 - -
Mepo5g00062 724 ProSitePatterns 'Homeobox' domain signature. 79 102 IPR017970 GO:0000981|GO:0006355
Mepo5g00062 724 Coils Coil 103 130 - -
Mepo5g00062 724 Coils Coil 12 32 - -
Mepo5g00062 724 SMART HOX_1 46 108 IPR001356 GO:0003677
Mepo5g00062 724 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
Mepo5g00062 724 SUPERFAMILY Homeodomain-like 32 102 IPR009057 -
Mepo5g00062 724 MobiDBLite consensus disorder prediction 29 54 - -
Mepo5g00062 724 FunFam Homeobox-leucine zipper protein HDG1 34 120 - -
Mepo5g00062 724 CDD START_ArGLABRA2_like 232 462 - -
Mepo5g00062 724 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 44 719 IPR042160 -
Mepo5g00062 724 SMART START_1 236 464 IPR002913 GO:0008289
Mepo5g00062 724 Pfam START domain 262 462 IPR002913 GO:0008289
Mepo5g00062 724 Gene3D - 31 117 - -
Mepo5g00062 724 ProSiteProfiles START domain profile. 228 467 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00062 Mepo-Chr5 630477 634962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00062 1 719 Homeobox Transcription Factor Family AT4G04890 53.784 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo5g00062 START 1e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00062 K09338 - tcc:18597106 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00062 5 630477 634962 Mepo5g00062 5 630477 634962 ECH
Mepo6g03280 6 44763927 44767868 Mepo5g00062 5 630477 634962 ECH