Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00057 ATGTTTCAGTATCCTATAGTTTCCAAATTCATTCAATTTTTCCTTGTTCTTTGTACTTTTGCTTTTCTTTCATATGTTGCCTTTGCAGATCCTCCATATGAAATTTGTTCCACAAGAAACAGTTATGCAAATGAAAGTTCCTTTGAGAACAATCTCAGTAACCTCCTTCTCTCTTTACCCTCTAATGGTTCAAATTCAATCTCCAAATTTGGCAACACTTCTTCAGGAATTGGCCTAGATAGAGTTTATGGCCTCTACATGTGTCTCGACTTTGTTTCAAATGAAACTTGCCTCAAATGCATAACAAACGCAATAGCGGACATTGTAAAACTCTGTCCTCAATCAAAAGAAGCAGTTGTATATGAAGAGTTCTGTCAAGTACGTTATTCCAATAAAAATTTCATAGGCTCACTGAATGTCACTGGAAACATTGGAAAAGATAATGTACAGAATATTTCGAAGCCGGTAAAATATGAGTCTTCTGTGAATAAGTTGTTGAATAGTCTTACCAAGATAGCATCTTTTAATGTTTCTGCTAATATGTATGCTACTGGAGAAGTACCCTTTGACGATAAAACACTATATGCCTTAGTGCAGTGTACAAGAGATTTATCATCCAATTATTGCAGTAGGTGTCTGCTAAGTGCTATTGGAGATATACCAGGTTGCTGTTATGCCTCCATTGGTGCTAGAGTTATGAGTCGTAGCTGTTATTTGAGATATGAATTTTATCCATTTTATCTTGGTGAAAAAGAACAAACAAAGTCTTCAACCAACATAGGAGGGAAAAGTAATAATGGAAACCGAAAAATATGTAAGGATTTCCCTTTTATTGATCTTGCATCTCTTCGTGTGGCTACCAGAAACTTCACCGATTCAAATAAGCTCGGGGAAGGTGGCTTTGGGCCTGTTTACAAGGGTATACTTAGTGATGGCCAAGAAGTGGCAATCAAAAGGCTCTCAATTTGCTCTGAGCAGGGCTCAGAAGAATTCATTAACGAGGTTATGCTGATATTGAAACTTCAACACAAAAATCTTGTAAAACTTCTGGGATTTTGTGTGGATGGAGAAGAGAAGCTTCTTGTATATGAATATTTGCCGAATGGTAGTCTTGATGTTTCCCTTTTCGAGCAACATGCTCAGCTGGATTGGACGAAATGGCTTGATATAATACATGGAATAGCAAGAGGAATCCTTTACCTTCATGAAGATTCTAGACTTCAAATAATACATAGAGATCTGAAAGCAAGTAATGTGTTGCTGGACAATGACATGAACCCAAAGATTTCAGACTTTGGAATGGCCAGAATATTTGCAGGAAGTGAAGGTGAAGCTAACACTACTACAATAGTTGGCACATACGGATATATGGCTCCGGAGTATGCAATGGAGGGTCTATATTCCATAAAATCTGATGTTTTTGCCTTTGGAGTATTATTGCTTGAGATCATTACAGGGAAACGTAACGCGGGTTTCTGTTACTCTAAAACCACTCCTAGCCTTCTAGCATATGCTTGGAAGCTGTGGAATGAAGGAAAAGGATTAGAAGTTGTGGATCCTATATTATTGGAATCATGTCTTGATTATGAGTCTGAAGTTCTTAGGTGCATTCATATTGGGCTCTTGTGTGTGCAGGAAGATCCACAACATAGGCCGACCATGTCAAATGTTGTGGTTCTATTGGGAAGTGAATCAATGGTTCTTCCTCAACCGAGACAACCAGCATTTTCTTCGCATAAGATGATTCACGGAGATCCGTCTGCATCAACAAATTGTTCATTGAATGAGAGTGTATGGTCTAGTATTTCACCGCGATGA 1818 0.3812 MFQYPIVSKFIQFFLVLCTFAFLSYVAFADPPYEICSTRNSYANESSFENNLSNLLLSLPSNGSNSISKFGNTSSGIGLDRVYGLYMCLDFVSNETCLKCITNAIADIVKLCPQSKEAVVYEEFCQVRYSNKNFIGSLNVTGNIGKDNVQNISKPVKYESSVNKLLNSLTKIASFNVSANMYATGEVPFDDKTLYALVQCTRDLSSNYCSRCLLSAIGDIPGCCYASIGARVMSRSCYLRYEFYPFYLGEKEQTKSSTNIGGKSNNGNRKICKDFPFIDLASLRVATRNFTDSNKLGEGGFGPVYKGILSDGQEVAIKRLSICSEQGSEEFINEVMLILKLQHKNLVKLLGFCVDGEEKLLVYEYLPNGSLDVSLFEQHAQLDWTKWLDIIHGIARGILYLHEDSRLQIIHRDLKASNVLLDNDMNPKISDFGMARIFAGSEGEANTTTIVGTYGYMAPEYAMEGLYSIKSDVFAFGVLLLEIITGKRNAGFCYSKTTPSLLAYAWKLWNEGKGLEVVDPILLESCLDYESEVLRCIHIGLLCVQEDPQHRPTMSNVVVLLGSESMVLPQPRQPAFSSHKMIHGDPSASTNCSLNESVWSSISPR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00057 605 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Mepo5g00057 605 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Mepo5g00057 605 FunFam Liguleless narrow1 366 569 - -
Mepo5g00057 605 FunFam Cysteine-rich receptor-like protein kinase 10 143 246 - -
Mepo5g00057 605 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Mepo5g00057 605 SUPERFAMILY Protein kinase-like (PK-like) 274 560 IPR011009 -
Mepo5g00057 605 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Mepo5g00057 605 Pfam Protein tyrosine and serine/threonine kinase 293 559 IPR001245 GO:0004672|GO:0006468
Mepo5g00057 605 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 596 - -
Mepo5g00057 605 Gene3D - 144 246 IPR038408 -
Mepo5g00057 605 Gene3D - 31 134 IPR038408 -
Mepo5g00057 605 FunFam Cysteine-rich receptor-like protein kinase 10 261 365 - -
Mepo5g00057 605 Gene3D Transferase(Phosphotransferase) domain 1 366 568 - -
Mepo5g00057 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Mepo5g00057 605 SMART serkin_6 290 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00057 605 Gene3D Phosphorylase Kinase; domain 1 251 365 - -
Mepo5g00057 605 ProSiteProfiles Protein kinase domain profile. 290 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00057 605 CDD STKc_IRAK 296 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00057 Mepo-Chr5 557451 564534 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00057 30 602 Receptor kinase-like Gene Family AT4G23140 42.219 1.87e-158 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo5g00057 PK_Tyr_Ser-Thr 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00057 - - gmx:102669364 802.742