Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00055 ATGATTACTACTTCCTCAAAACAAATCTGGCCATGGACAACCTCGTACGTAGTTTCCATCCTGTTTGGTTTCCTCTATCTAACCTTAGCAACAGAAGCATCTCCAACATACCTAGGATCTTACTGCAACAACAACACAACATACACTCCAAACAGCACACTCTCTACCAACCTCAATGTCCTCCTCAATTCTCTTGCAACCAACTCTTCTCAACAACAAGAAGGTTACTACATGACCATCATGGGTTTCGGAACAACCAACGCTGTCAACGGAATATTTCTCTGTCGTGGTGATGTCAACACAACAACTTGTCAAAACTGTGTTACTGACGCGGCTACACAGATCAAACGACGTTGTACAAATCAAACAGAAGCTGTTATTTGGTATCAGGAATGTCTTCTTCGTTACACAAACACATTTTTTAGATATTACAGTATTGAGCCTAGGTTAAATCCTAAAAACGGTAAAAATGTTTCCGGTGTTGACTTTGAACGGTTCAATGAAACGGTGTTTGGGTTGTTGAATGAATTGGTGATTGCGGCGGCGAATTCAAGGACGGCGAAGAAATTTTCCACCGGAGAAGTGGAAGTGACGAGAAGCATGAAGGTTTATGGATCAGGACAGTGTAGTACGGATTTAACGAGTTCTCAATGTGAGATTTGTTTAAGAAATGCTATTGGAACATTGCCACAGTGTTGCAGTGGACAAGAGGGTGCAAGTGCTTTGCTTGCATCTTGTATTGTTAGATATGAACTCTATCCGTTTTACACCTTATATGCTACACCATCATCATCTTCTTCAGGAAGAAATGGAGTTGGAACAAAAGCAATTGTCATAATTATTTCCCTGGCCATTGTTCCTGTATTACTTTTCTTTATAGGTTGCTATTACAAACGGAGAAGATCAAGGCAGAGACGTAGGACAATGCTAAGGGAAAATTTTGGGGATGAACTTAAAACACTAGACTCCTTACAATTCAAGTTTTCTACAATTGAAGCTGCCACCAACAAATTTTCAAGTGAGAACGAGATAGGCAAAGGAGGATTTGGTATTGTCTACAAGGGTGTTCTTTCTGATGGACAACAAATAGCAGTAAAGAAACTCTCAAGAAGTTCAGGACAAGGTTCTATAGAATTTCAAAATGAAATTTTATTAATAGCCAAGCTTCAACATAGAAATTTAGTGACTTTGTTAGGATTCTGCTTGGAAGAACGAGAGAAAATGCTTATATACGAATATGTGCCTAATAAGAGTCTTGATTATTTCCTATTTGATTCCAAAAAGCACAGAGTGTTACATTGGTTTGAGCGTTATAAAATTATAGGAGGAATTGCACGAGGAATTCTTTACTTACATGAGTATTCAAGACTTAAAGTCATACATCGAGATCTCAAACCTAGCAATGTATTGTTAGATGACAACATGAATCCAAAAATATCAGATTTTGGTTTGGCAAGAATAGTTGCAATCGATCAGGTACAAGGAAGCACTAATAGAATCGTGGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAAAAATCGGATGTGTTTAGTTTTGGAGTTATAATTCTTGAGATAGTTAGTGGAAAGAGAAATAGTCGTCCCATTCAATCACACGACTTTGAGGACATCCTAAGAACTGCTTGGAGACTATGGAGGAATCAAACGCCATTAGAAATGTTGGACCCTATTCTAAAAGACATGTTTTCTCATAGTGAAGTTATTAAATGCATTCAGCTTGGTTTATTATGTGTTCAAGAAAATCCTGACGATAGACCTACAATGGCACAAGTTGTTTCATATCTCAGTAGTCTTTTAGTTGAATTGCCACTTCCTCTAGAGCCAGCATTTTCCATGGATAGAGATATGAAGTTAAACATACCAACAACAGAGTCTAGTTCTGGCCAATTTATCAGTAACTCCACGGCATCCTCAATCAATGACTTAACTAAGAGTCGATTTTTCCCTCGATAG 1995 0.3799 MITTSSKQIWPWTTSYVVSILFGFLYLTLATEASPTYLGSYCNNNTTYTPNSTLSTNLNVLLNSLATNSSQQQEGYYMTIMGFGTTNAVNGIFLCRGDVNTTTCQNCVTDAATQIKRRCTNQTEAVIWYQECLLRYTNTFFRYYSIEPRLNPKNGKNVSGVDFERFNETVFGLLNELVIAAANSRTAKKFSTGEVEVTRSMKVYGSGQCSTDLTSSQCEICLRNAIGTLPQCCSGQEGASALLASCIVRYELYPFYTLYATPSSSSSGRNGVGTKAIVIIISLAIVPVLLFFIGCYYKRRRSRQRRRTMLRENFGDELKTLDSLQFKFSTIEAATNKFSSENEIGKGGFGIVYKGVLSDGQQIAVKKLSRSSGQGSIEFQNEILLIAKLQHRNLVTLLGFCLEEREKMLIYEYVPNKSLDYFLFDSKKHRVLHWFERYKIIGGIARGILYLHEYSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIVAIDQVQGSTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIILEIVSGKRNSRPIQSHDFEDILRTAWRLWRNQTPLEMLDPILKDMFSHSEVIKCIQLGLLCVQENPDDRPTMAQVVSYLSSLLVELPLPLEPAFSMDRDMKLNIPTTESSSGQFISNSTASSINDLTKSRFFPR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00055 664 FunFam Cysteine-rich receptor-like protein kinase 10 149 255 - -
Mepo5g00055 664 SUPERFAMILY Protein kinase-like (PK-like) 324 632 IPR011009 -
Mepo5g00055 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 656 - -
Mepo5g00055 664 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Mepo5g00055 664 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
Mepo5g00055 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Mepo5g00055 664 SMART serkin_6 338 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00055 664 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00055 664 FunFam Cysteine-rich receptor-like protein kinase 10 299 413 - -
Mepo5g00055 664 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 35 141 - -
Mepo5g00055 664 CDD STKc_IRAK 344 609 - -
Mepo5g00055 664 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Mepo5g00055 664 Pfam Protein kinase domain 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00055 664 Gene3D Phosphorylase Kinase; domain 1 298 413 - -
Mepo5g00055 664 FunFam cysteine-rich receptor-like protein kinase 10 414 616 - -
Mepo5g00055 664 Pfam Salt stress response/antifungal 164 253 IPR002902 -
Mepo5g00055 664 Pfam Salt stress response/antifungal 42 138 IPR002902 -
Mepo5g00055 664 Gene3D - 151 255 IPR038408 -
Mepo5g00055 664 Gene3D - 34 141 IPR038408 -
Mepo5g00055 664 Gene3D Transferase(Phosphotransferase) domain 1 414 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00055 Mepo-Chr5 536759 541870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00055 18 664 Receptor kinase-like Gene Family AT4G05200 44.510 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo5g00055 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00055 - - cam:101500396 1028.85