Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00031 ATGAAAAAGGAGCAACCATGGTTTGAGATAACTGCCGCCGCCGCCGAGGAAGAAATCATGGGTCACTCTAACGTTTGGAACTCTCACCCCAAGACCTATGGTCCTGGTTCTCGCACATGCCGTGTGTGTGGAAACTCTCATGGATTGATTAGGAAGTACGGACTCATGTGTTGCAGGCAGTGCTTCCACAGCAATGCCAAGGAAATTGGCTTCATTAAGAGAGCTAGACAAGGTGTTGAGATCGGAGACGAGTTTTAA 258 0.4845 MKKEQPWFEITAAAAEEEIMGHSNVWNSHPKTYGPGSRTCRVCGNSHGLIRKYGLMCCRQCFHSNAKEIGFIKRARQGVEIGDEF 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00031 85 FunFam 40S ribosomal protein S29 20 75 - -
Mepo5g00031 85 Gene3D 30s Ribosomal Protein S14; Chain N 20 74 IPR043140 -
Mepo5g00031 85 Pfam Ribosomal protein S14p/S29e 26 73 IPR001209 GO:0003735|GO:0005840|GO:0006412
Mepo5g00031 85 PANTHER 40S RIBOSOMAL PROTEIN S29 20 74 IPR039744 GO:0003735|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00031 Mepo-Chr5 339274 341183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00031 20 73 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 1.42e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00031 K02980 - han:110916663 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00031 5 339274 341183 Mepo4g04536 4 55089623 55090854 PCT