Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00001 ATGCGCGTTCCTCTTTTTTCTTCTCCCAGCCAAAGCAAATCCTATCGAACAACATCCACCACCACACCACCGCCGGCGAACCGCGACCACTCTCCTCCTTCTCCATCCATCACCGCCGCATCCTCCTCCATCTTCTGTATTGATTCTTTAGTTTTGAGAGCTATCTCCATCCATCCTTCTCCACAAACCCTAATTGTTGTAACTTGTAAGATTCAAGATGTTCATTTTGTGGTCAGCAACTGCGTCCCCACTTTAACAAAGTATTGTCAATTTGGGATTCATTATTCTTATTATTACGATTACAAAAGAACAAAATCAACTCGTTCCGGGATGAGGGACACAGTAGTCTCTGATTGGGAACTGCAGGAAGGTCGAATTGCGGTTTCAACTTTTCTTCAGCAAATGGGTGTGTCGGCCGAGGAATCAGAATCAATAGCATCAAACTCCCCAGCATATCTCAACATGTTGGTAGAGAGTGTTAGGGATTTGGAGCACTTCTCTTCTTCTATGCTGGATGCTAATGCTAATGCTGACGGTGCGTTTAACTTGAACTTCAACTACAGGGACAAGATTCTTCACATTGCAACTCTCAAAGGTGACAACGGCAAACTAGCCTACTTAGAGAGTCTCGGCTTCACACTCTCTTCCTCAATGAATGTCGCCAGGTATATATCCTCCGCTGACACCCTCCCGTCTCTCATTAACAAAGTTACCTCTATCAAACAACTCCTTTTTCCTCCCGCTCACACTACTCATCACTATCAACTCCTTGTCAAGAATATTCGCCTCATCATGACCCACTTATCAATTTCACTAGATGAAGATATGCAACACACTTTCTCCTTTTTCGAAAAGGTTCAAGCAAGGCGTGGAGGTTTAAATATCCTCGCTTCTCAAGATGCTTCTTTCCGTTGCTTCATTGAATCATTTCCTCGTATACTTTTGTTATCACAAAATAATCACATCTCACCTATACTGGATATTCTCCAAAATATTGGGATCCCCGCAGATCGCATCCCCAACATAATATTGGCTTTTCCTCCTATTCTGCTCTGGAATGTTGAACTCCTTCAAACTAGAGTTCTGGCCTTGAACCAGATTGATGGTGTGGATAAAGATTATGCCAAGTTGATGCTAAAATATCCGTGGGTTCTATCTACAAGCATTCAAGAGAACTATAAGGAGGTCCTTTCCTTTTTATATTCCGTGAAGGTTCCAAAGACATGGACAGACCGTGCAATCAAAAGACAACCTCAACTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGGTAGATCAGTTTGCCGAACTAGGAGTTCAAAGGAAAAAGTTGTATCAGGTTATCACTAGAAGTCCTCAGCTATTATTACTGAAGCCCGAAGACTTTCTACAGGTTGTTATGTTCTTTGAAAATATGGGTTTTGATAAAGAAAATATTGGGAGAATACTTGCTCGCTGCCCTGAAATTTTTGCCACCAGCATTAGTAAAACTTTACAGAGCAAGATTGAGTTCCTTAGTAGAATTGGAGTTTCTAAAGCTTACATTCCTTTGGTTATCAGAAAGTATCCAGAACTACTTGTGTCTGACATTAACAAAACCTTACCTCAACGGATAGTGTACTTTATGAAGCTAGGACTTTCAGAGAAGGAAATTGCATTTATGGTACGTACATTTTCTCCTCTACTTGGGTACAGCATAAAGGAGGTTCTGATGCCAAAATTAGAATTTCTGGTGAACTCAATGAAGAGGCCGGTAAGAGACGTGGTGAGCTACCCTAGGTATTTTAGCTATTCACTAGAAAAGAAGATAAAGCCAAGATATCGGGTTCTGAAAGGAAGGAATATCGAATGTAGCTTAAAGGATATGCTGGCAAAAAATGATGAAGAATTTGCTGCTGAATTTATGGGTGTTGGAAAGATGCTCGTCTGTCCTCCTTTGTCTTCACATGATAAGCTGTAA 1962 0.4118 MRVPLFSSPSQSKSYRTTSTTTPPPANRDHSPPSPSITAASSSIFCIDSLVLRAISIHPSPQTLIVVTCKIQDVHFVVSNCVPTLTKYCQFGIHYSYYYDYKRTKSTRSGMRDTVVSDWELQEGRIAVSTFLQQMGVSAEESESIASNSPAYLNMLVESVRDLEHFSSSMLDANANADGAFNLNFNYRDKILHIATLKGDNGKLAYLESLGFTLSSSMNVARYISSADTLPSLINKVTSIKQLLFPPAHTTHHYQLLVKNIRLIMTHLSISLDEDMQHTFSFFEKVQARRGGLNILASQDASFRCFIESFPRILLLSQNNHISPILDILQNIGIPADRIPNIILAFPPILLWNVELLQTRVLALNQIDGVDKDYAKLMLKYPWVLSTSIQENYKEVLSFLYSVKVPKTWTDRAIKRQPQLLGCSTSKLKLMVDQFAELGVQRKKLYQVITRSPQLLLLKPEDFLQVVMFFENMGFDKENIGRILARCPEIFATSISKTLQSKIEFLSRIGVSKAYIPLVIRKYPELLVSDINKTLPQRIVYFMKLGLSEKEIAFMVRTFSPLLGYSIKEVLMPKLEFLVNSMKRPVRDVVSYPRYFSYSLEKKIKPRYRVLKGRNIECSLKDMLAKNDEEFAAEFMGVGKMLVCPPLSSHDKL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00001 653 MobiDBLite consensus disorder prediction 1 36 - -
Mepo5g00001 653 Gene3D Transcription termination factor 3, mitochondrial 427 640 IPR038538 -
Mepo5g00001 653 SMART mt_12 517 548 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 SMART mt_12 375 406 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 SMART mt_12 481 512 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 SMART mt_12 446 476 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 SMART mt_12 411 441 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 SMART mt_12 586 617 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 SMART mt_12 553 585 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 FunFam Mitochondrial transcription termination factor family protein 426 639 - -
Mepo5g00001 653 Pfam mTERF 326 632 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 PANTHER CGI-12 PROTEIN-RELATED 541 636 IPR003690 GO:0003690|GO:0006355
Mepo5g00001 653 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00001 Mepo-Chr5 54235 61970 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo5g00001 mTERF 5.9e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00001 K15032 - gmx:100802127 710.294