LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo54g00027	ATGGAAGATAGGAGAGTGAATATAATTGCTGCTATATCAGTGATAACACTGATCATCATCATAATCATTGCACGTATCTTGTTAAAGCTGTCAAAGGCTTTCTTCCTCATCTGTGGCGCTGGCGTTGCTGTGATCCTTGCAGTATTTGGTTTTGTTTTTCTCAGCTTAATCTACAAACGCAGAAGGAGAATATTGGAATCACAGTTGAAATCTGAAGGTCAAGAGATTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCAGGGGTTCCAACAAAGTTCAGATACAATGAGCTTGAGGAAGCAACGGATGGATTTCAATCACTTATTGGAAGAGGTTCTTCGGCTTCGGTTTTCAAAGGCATTCTCAATGATGGAACTTCGGTTGCTGTGAAAAGAATTGATGCAGAAGAAAGAGGAGCAAGAGAATTTAAATCAGAAGTTGCAGCTATAGCTAATGTTCATCATGTGAATCTTGTGAGACTTTTTGGGTATTGTAATTCTTCTTCAGCTCCTAGGTACCTTGTTTATGATTATGTATCAAATGGATCATTAGATTGTTGGATTTTCCCGAAAAGGGATTCGCAAAGGCGTCCACGTCCCGGTGGATGCTTGTCGTGGAACTTGAGGTATAAAGTCGCAATTAACGTTGCTAAAGGACTTGCATATCTTCACCACGATTGCAGATCAAGGATCTTACATCTTGATATAAAGCCAGAAAATATACTATTGGATGAGACTTTTAGAGCACTTGTTTCGGATTTTGGTCTTGCAAAGCTTACTGGTAAAGACGAAAGTCAAGCGGTGTCTACAATTAGAGGAACAAGAGGTTATATGGCACCTGAATGGCTTCTAGAAAAGGGTATTTCAGATAAAACTGATGTATATAGTTATGGGATGGTTTTATTAGAGATTGTTGGAGGAAGAAAAAATGTGTGTTTAGTTGAAGATGAAAAGGACAAGTCAAAAAGGAAATGGCAATATTTTCCAAAGATTGTAAATGAGAAAGTGAAACAAGGGAAAATCATGGAAATCGTTGATCATAGGTTAATGGAATGTGGCGGTGTTGATGAGGGTGAGGTGGTTAAATTGGTTTATGTTGCTTTATGGTGTGTGCAAGAGAAGCCAAGGTTGAGGCCTAGTATGGCTAGAGTGGTTGATATGCTTGAAGGGCGTGTGAGAGTGGATGAGCCACCAGGTACAAGAATGATTCTTGTTGATTTTCTCAGTGTTGATGATGATAATGTTACAGATAGTAATATCAATATGATGCCAAGGTTGGACACTATGTCTAGTCAAGGAACACAAAGCAATGTGGAATGTAATTCTACCTACTCTTTTGCTACTACTGTTTTCTCTGGAAGATAG	1365	0.3868	MEDRRVNIIAAISVITLIIIIIIARILLKLSKAFFLICGAGVAVILAVFGFVFLSLIYKRRRRILESQLKSEGQEIRIEYSFLRKVAGVPTKFRYNELEEATDGFQSLIGRGSSASVFKGILNDGTSVAVKRIDAEERGAREFKSEVAAIANVHHVNLVRLFGYCNSSSAPRYLVYDYVSNGSLDCWIFPKRDSQRRPRPGGCLSWNLRYKVAINVAKGLAYLHHDCRSRILHLDIKPENILLDETFRALVSDFGLAKLTGKDESQAVSTIRGTRGYMAPEWLLEKGISDKTDVYSYGMVLLEIVGGRKNVCLVEDEKDKSKRKWQYFPKIVNEKVKQGKIMEIVDHRLMECGGVDEGEVVKLVYVALWCVQEKPRLRPSMARVVDMLEGRVRVDEPPGTRMILVDFLSVDDDNVTDSNINMMPRLDTMSSQGTQSNVECNSTYSFATTVFSGR	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo54g00027	454	SMART	serkin_6	103	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo54g00027	454	SUPERFAMILY	Protein kinase-like (PK-like)	85	389	IPR011009	-
	Mepo54g00027	454	ProSitePatterns	Protein kinases ATP-binding region signature.	109	131	IPR017441	GO:0005524
	Mepo54g00027	454	Pfam	Protein kinase domain	107	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo54g00027	454	ProSiteProfiles	Protein kinase domain profile.	103	392	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo54g00027	454	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	42	398	-	-
	Mepo54g00027	454	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	231	243	IPR008271	GO:0004672\|GO:0006468
	Mepo54g00027	454	FunFam	Putative receptor-like protein kinase	179	396	-	-
	Mepo54g00027	454	FunFam	Putative receptor-like protein kinase	70	178	-	-
	Mepo54g00027	454	Gene3D	Transferase(Phosphotransferase) domain 1	179	397	-	-
	Mepo54g00027	454	Gene3D	Phosphorylase Kinase; domain 1	67	178	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo54g00027	1	400	Receptor kinase-like Gene Family	AT5G20050	63.682	1.03e-175	498

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mepo54g00027		Pkinase	1.5e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo54g00027	-		-	gmx:100791152	691.034