Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g05061 ATGGGTTGTTTTTCGTGTTTCGATTCGAAGGAGGATGAGAAGTTGAATCCTAATCAGCATCAACATCAGGAAACCCATCATAATCATCATCACGATCATAATAATATTTCTAGATTGCCCTCTTCCGGACCCTCTGGAGGAGTGGAGAAGCTGCGGTCAACAAGTAATGGATCTTCCAAAAGGGAATTGCAATTGCAATTGCAATTACCTGCTGCTCTCAAAGACGGACCACCTGGCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCCGCTGCTACCAAAAACTTCAGGCCTCAGTCCTTTTTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGACGCCTCGAAACCACGGGTCAGGCTGTTGCTGTTAAACAGTTGGACAGAAACGGTCTCCAGGGTAATCGGGAGTTCCTTGTCGAGGTTCTCATGCTCAGTCTTCTACATAGCCCTAACCTTGTCAGTCTCATTGGATACTGTGCCGATGGCGACCAACGCCTCCTAGTTTATGAATTTATGCCATTGGGATCGTTGGAAGACCATCTTCACGATCTCCCCCCGGATAAGGAGCCATTAGATTGGAACACTAGAATGAAAATAGCTGCTGGTGCCGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTAATTTATAGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCTGACTTTGGTTTGGCAAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAATATGCTATGACTGGACAATTGACTGTAAAATCTGATGTATATAGTTTTGGTGTAGTCTTTTTGGAGCTAATTACTGGCCGTAAAGCCATTGACAGCACCCGCCCCCATGGAGAGCAAAACCTTGTCACATGGGCACGGCCTTTGTTCAATGACCGTAGGAAGTTTTCAAAGTTGGCAGATCCACGGTTGCAGGGGCGGTATCCCATGCGAGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAGCAGGCAGCTGCACGTCCTCTGATTGGGGATGTGGTGACAGCCCTCTCTTATCTTGCCAACCAGGCACATGATACCAACAATGCTAGTATTGGTAATAATAAGGGAACTGGTGATGAGAAAAGGAATAGAGATGATAAAGGTGGAAGAATATTAAAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTAAGAGAAAAAAGACGACAGAGTGTGCAGGGCAGTTTTGATGCTTCTAATGCCTAG 1428 0.4573 MGCFSCFDSKEDEKLNPNQHQHQETHHNHHHDHNNISRLPSSGPSGGVEKLRSTSNGSSKRELQLQLQLPAALKDGPPGQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHSPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAHDTNNASIGNNKGTGDEKRNRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLREKRRQSVQGSFDASNA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g05061 475 MobiDBLite consensus disorder prediction 37 63 - -
Mepo4g05061 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Mepo4g05061 475 ProSiteProfiles Protein kinase domain profile. 98 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g05061 475 Gene3D Transferase(Phosphotransferase) domain 1 175 398 - -
Mepo4g05061 475 SUPERFAMILY Protein kinase-like (PK-like) 83 370 IPR011009 -
Mepo4g05061 475 MobiDBLite consensus disorder prediction 393 441 - -
Mepo4g05061 475 MobiDBLite consensus disorder prediction 382 441 - -
Mepo4g05061 475 Gene3D Phosphorylase Kinase; domain 1 82 174 - -
Mepo4g05061 475 PANTHER OS07G0668900 PROTEIN 3 384 - -
Mepo4g05061 475 MobiDBLite consensus disorder prediction 11 63 - -
Mepo4g05061 475 CDD STKc_IRAK 104 372 - -
Mepo4g05061 475 FunFam Serine/threonine-protein kinase PBS1 175 390 - -
Mepo4g05061 475 MobiDBLite consensus disorder prediction 11 36 - -
Mepo4g05061 475 Pfam Protein kinase domain 101 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g05061 475 FunFam Serine/threonine-protein kinase PBS1 71 174 - -
Mepo4g05061 475 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g05061 Mepo-Chr4 59859413 59867161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g05061 81 463 Glycoside Hydrolase AT3G07070 62.402 8.70e-165 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo4g05061 Pkinase 9.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g05061 K13430 - gmx:100777987 782.711