Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g05020 ATGCCTCAGCTTCGTAGTGGTGTCCGACGTCCTCGTCCTGCTGCTCCTTCTCCTTCTCCTCCTCCGCCACCCAAACCGTCCACCAGAGGTAGACCCAGAACTAGATTAGCCGCCGCCAAGAACATCAACAAATCATCCCAGGAGGAGGACCCACCGTTGTTATTACAACCTGATACTTTCGTTGTTGAACCTCCCAAAGAGAACTTTCTTATTGAACAAGAACAAGAAGAAGAAGAAGAAGACGCTGTTCGTGTGATGGGTGATGAAAGAGTTGGTCTTAGTGCTAATAAAGATAAGGCTGTTGCTGCTGTTCCTGAGGAAGATGCCAACTCTCCACCTCTTCCAGAAAGGGTTCAAGTAGGAGGATCGCCTCTATACAAGGTAGAAAGGAAACTTGGTAAAGGTGGATTTGGCCAGGTTTTTGTTGGCCGTCGTGAGCGTGCAAATGCACCAGGAGCTGTGGAGGTTGCTCTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTATGGCCCTCCTTATGAGTGGCAAGTATACAACACCCTTGGTGGTAGTCATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTTATGGACATTCTTGGTCCAAGTTTGTGGGATGTATGGAATACCTCAGGCCAGTCGATGTCTCCTGAAATGGTCTCATGTATAGCTGTCGAGTCATTATCAATACTTGAAAAGTTGCATGCAAAAGGTTATGTACATGGAGATGTAAAACCAGAGAACTTTTTACTAGGCCAGCCCAACACAGCACAGGAGAAGAAATTGTTTCTTGTTGACCTTGGTTTAGCAACAAAGTGGAAAGATTCGTCAAGTGGAAAGCACACTGAATATGATCAACGCCCCGACATGTTTAGAGGGACTGTTCGATATGCTAGCGTTCATGCTCATTTGGGAAGAACTGCCAGTAGAAGGGATGATCTTGAATCACTTGCATATACACTAATCTTCCTTCATAGGGGTCGATTGCCATGGCAAGGTTTTCAGGGTGATGGCAAATCCTTCCTCGTTTGCAAAAAGAAAATGGGAACATCTGCTGAGATGCTGTGCTGCTTTTGCCCCGCTCCTTTTAAACAATTTCTCGAGACTGTGGTGAACATGAAGTTTGATGAAGAACCTAACTATTCCAAGCTAATATCCTTGTTTGATGGTATGCTCGGACCTAATCCTGCATTGCGGCCAATTAATACTGAAGGCGCTCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATGTTGAGGCAGATGATGATTCACAGCCCAAAAAGAAGGTTCGTTCAGGGATTCCTGCTTCGCAATGGATTTCAGTATACAATGCTAGACAACCAATGAAACAAAGGTATCATTACAATGTGGCTGATGGAAGATTAGCTCAGCATATTGAGAGAGGGATTGCAGACGACCTTCTTATTAGCTGTGTATCATGCTGTTCCAATCTCTGGGCACTTATCATGGATGCTGGAACTAATTATTCGGCTCAAGTTTACAAATTATCACCATTATTTTTACACAAGGAATGGATCTTGGAACAATGGGATAAGAATTTCTACATTACTTCTATTGCAGGGGCCAGTAATGGAAGCTCTGTTGTGGTGATGTCAAAAGGTACAAGGTATACTCAACAATCATACAAAGTAAGTGAATCTTTCCCCTACAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACCTCAATGGGTACTGCTGGAAATCGCTGGGGTATTGTTATGTCTCGCAATGCTGGATTCAGTGATCAGGTGGTGGAACTTGATTTTCTCTATCCAAGTGAAGGCATCCATAAACGTTGGGATAATGGTTATAGGATTACAGCAACTGCAGCTACATTGGATCAATCTGCGCTTATATTAAGCATCCCGAGGAACAGACCTGGTGATGAAACTCAGGAAACTCTGCGTACATCTCAATTTCCCAGCGCTCATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCCCATCTGTGCTATGGGCGCACAGTATGCTGA 2052 0.4352 MPQLRSGVRRPRPAAPSPSPPPPPKPSTRGRPRTRLAAAKNINKSSQEEDPPLLLQPDTFVVEPPKENFLIEQEQEEEEEDAVRVMGDERVGLSANKDKAVAAVPEEDANSPPLPERVQVGGSPLYKVERKLGKGGFGQVFVGRRERANAPGAVEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDILGPSLWDVWNTSGQSMSPEMVSCIAVESLSILEKLHAKGYVHGDVKPENFLLGQPNTAQEKKLFLVDLGLATKWKDSSSGKHTEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGFQGDGKSFLVCKKKMGTSAEMLCCFCPAPFKQFLETVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNVEADDDSQPKKKVRSGIPASQWISVYNARQPMKQRYHYNVADGRLAQHIERGIADDLLISCVSCCSNLWALIMDAGTNYSAQVYKLSPLFLHKEWILEQWDKNFYITSIAGASNGSSVVVMSKGTRYTQQSYKVSESFPYKWINKKWKEGFHVTSMGTAGNRWGIVMSRNAGFSDQVVELDFLYPSEGIHKRWDNGYRITATAATLDQSALILSIPRNRPGDETQETLRTSQFPSAHVKEKWSKNLYLAHLCYGRTVC 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g05020 683 PANTHER CASEIN KINASE-RELATED 126 645 - -
Mepo4g05020 683 Pfam Protein kinase domain 126 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g05020 683 CDD STKc_CK1 126 396 - -
Mepo4g05020 683 MobiDBLite consensus disorder prediction 13 29 - -
Mepo4g05020 683 FunFam casein kinase 1-like protein HD16 97 439 - -
Mepo4g05020 683 ProSiteProfiles Protein kinase domain profile. 126 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g05020 683 Gene3D Transferase(Phosphotransferase) domain 1 94 442 - -
Mepo4g05020 683 SMART serkin_6 126 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g05020 683 ProSitePatterns Protein kinases ATP-binding region signature. 132 159 IPR017441 GO:0005524
Mepo4g05020 683 SUPERFAMILY Protein kinase-like (PK-like) 126 404 IPR011009 -
Mepo4g05020 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Mepo4g05020 683 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g05020 Mepo-Chr4 59348340 59353918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g05020 125 279 EF-hand Containing Proteins AT4G21940 27.215 2.57e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mepo4g05020 Pkinase 8.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g05020 - - gmx:100819969 1105.51