Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g05000 ATGTCGGCTCGCATTGTAGCTGAAAATGTTCCCGATTCTTATTTCGATTTTATGGAAATGGACGACTTCACGCGCCGCCGCGACGCCGGTGATATGCCGACTCTCGGACAGCTGCTCAAACACGTTGGAGATGTACGAAAGGAAGCTATCGGAGATGGCAGCGAGACGCCGGTGCATCACACTCTCGACCTCAACGGAATGGAGGTTCGATCACTTCCGTTTGTTCTTTCCTTCAACAACCTTACCTATAGTGTTAAGATACGTCATAAAATGAGTTTCACCGACTTATTTTCCCGCCGCCGTGCATCTCCGGTGGCTGAGACGCCTGCGCTTGGGGAGACGGCGTTTACACGGAGTAAAATTCTGCTCAACGACATCTCCGGCGAAGCACGTGACGGTGAGATCATGGCGTTTCTCGGAGCAAGTGGCTCTGGGAAATCAACTCTGATTGATGCTCTAGCAAACAGGATCGCAAAAGGAAAATTGAAAGGAACTGTGAAGCTCAACGGCGAGTCGGTAGAGTCTCGTCTTCTTAAGGTGATTTCTGCCTATGTGATGCAAGATGATCTCCTCTTTCCAATGCTCACAGTGGAAGAAACACTCACCTTTGCAGCTGAATTCCGATTACCTCGATCACTCTCAAAATCAAAGAAAAACGCCCGTGTTCAAGCTTTAATTGATCAACTAGGACTCCGCAACGCAGCGAAAACAGTTATCGGAGATGAAGGTCACCGTGGAGTCTCCGGTGGAGAAAGGCGTCGAGTTTCAATAGGAATTGACATAATTCATGATCCAATAGTGCTCTTCCTTGACGAGCCAACTTCAGGATTGGATTCTACAAGCGCTTTCATGGTTGTGAAAGTACTTCAAAGAATTGCACAAAGTGGAAGCATTGTGATCATGTCAATTCATCAACCAAGTTACAGAATCTTAGGTCTTCTTGATCGTATGATCTTCTTATCGCGTGGACAGACAGTTTACAGCGGTTCACCATCTCAGTTACCTTCATACTTTGCAGAATTCGGGCATCCCATACCTGAAGGTGATAACCGAACAGAATTCGCGTTGGACCTGATTCGCGAATTAGAAGGTTCACCTGGAGGAACAAAAAGCTTAGTTGAATTCAACAAATCATGGCAAAGCATGACTAAACTTCACAACAACAATGATGTTTCACATAATGCAACACCCTCGTTATCATTGAAGGAAGCTATCAGCGCCAGCATTTCGAGAGGGAAACTAGTTTCTGGCGCAACAGCTGCAACTAATTCAAATGCAATAGCCACATCACCATCTTCGTCTTCATCCTCAATCGTGCCTACTTATGCAAATCCGTTTTGGATTGAGTTATTAACACTTTCGAAGCGTTCAATAACTAATTCAAGGCGAATGCCTGAACTATTTGGGATAAGATTGGGTGCTGTTATGGTAACTGGTTTCATTCTTGCAACAATGTTTTGGCAACTTGACAACACTCCAAAAGGAGTACAAGAGAGGCTTGGATTCTTTGCTTTTGCTATGTCAACTACTTTCTACACCACCGCAGATGCACTACCAGTTTTCATTCAAGAACGGTTCATTTTCATGAGAGAAACCTCTCACAATGCTTATAGGAGATGGTCCTATGTGATTTCTCATGCTCTTGTTGCTTTGCCTGCTTTGTTGTTTCTCTCACTTGCTTTTGCCTGTATAACATTTTGGGCTGTGGGGCTTGATGGTGGATTCTCAGGTTTTTTGTTTTACTTTGTTATCATTCTTGCTTCATTTTGGGCCGGGAACTCTTTCGTCTCATTTCTTTCAGGTGTGGTTCCTCATGTGATGTTGGGTTACACTATCGTGGTTGCAATTCTTGCTTATTTCTTATTGTTCAGTGGGTTCTTTATTAATAGGGATAGAATCCCTGGGTATTGGATTTGGTTCCATTACATGTCATTGGTTAAGTACCCATATGAAGCAGTTCTACAGAACGAGTTTAGTGATGCAGCTAAGTGTTTTGTGAGAGGGGTGCAGATTTTTGATAACTCACCTCTTGCTTCAGTGTCTGATGCATTGAAGTTGAAATTGTTGGACAGTATGAGTGATACACTAGGAATGAAAATCACAGCGTCTACTTGTTTGACAACTGGTACTGATTTGTTGAAGCAAAATGCGGTGACGGATTTGAGCAAGTGGAATTGTTTGTGGGTAACTGTGGCTTGGGGTTTCTTCTTCAGGATTCTATTCTATTTATCTTTGTTGGTGGGTAGCAAGAACAAGAGGAGTTGA 2265 0.4362 MSARIVAENVPDSYFDFMEMDDFTRRRDAGDMPTLGQLLKHVGDVRKEAIGDGSETPVHHTLDLNGMEVRSLPFVLSFNNLTYSVKIRHKMSFTDLFSRRRASPVAETPALGETAFTRSKILLNDISGEARDGEIMAFLGASGSGKSTLIDALANRIAKGKLKGTVKLNGESVESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRSLSKSKKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPSYFAEFGHPIPEGDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKLHNNNDVSHNATPSLSLKEAISASISRGKLVSGATAATNSNAIATSPSSSSSSIVPTYANPFWIELLTLSKRSITNSRRMPELFGIRLGAVMVTGFILATMFWQLDNTPKGVQERLGFFAFAMSTTFYTTADALPVFIQERFIFMRETSHNAYRRWSYVISHALVALPALLFLSLAFACITFWAVGLDGGFSGFLFYFVIILASFWAGNSFVSFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPGYWIWFHYMSLVKYPYEAVLQNEFSDAAKCFVRGVQIFDNSPLASVSDALKLKLLDSMSDTLGMKITASTCLTTGTDLLKQNAVTDLSKWNCLWVTVAWGFFFRILFYLSLLVGSKNKRS 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g05000 754 Pfam ABC-2 type transporter 304 385 IPR043926 GO:0140359
Mepo4g05000 754 Pfam ABC-2 type transporter 450 658 IPR013525 GO:0016020|GO:0140359
Mepo4g05000 754 SMART AAA_5 132 324 IPR003593 GO:0016887
Mepo4g05000 754 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 91 347 IPR003439 GO:0005524
Mepo4g05000 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 339 IPR027417 -
Mepo4g05000 754 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 60 742 - -
Mepo4g05000 754 ProSitePatterns ABC transporters family signature. 247 261 IPR017871 GO:0005524|GO:0016887
Mepo4g05000 754 Gene3D - 113 340 IPR027417 -
Mepo4g05000 754 FunFam ABC transporter G family member 6 112 338 - -
Mepo4g05000 754 Pfam ABC transporter 123 275 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g05000 Mepo-Chr4 59191523 59194214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g05000 122 334 Calmodulin-binding Proteins AT2G36910 28.636 6.95e-12 67.4