Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04983 ATGATGCAGCCATACGGAGATGCAGATTCCAGTTTGAGGTCCATCGCCGGTCGTGCTGAGGGTTTCGGTCGCCTCGCCATCGGTGGTCTTCACGGTGCTCTCTATTTCGTTACCTCCCTTTCAGATGATGGTCCTGGTTCCCTTCGCGAAGGATGTCGTAGAAAGGATCCGCTATGGATTGTTTTTGAAGTTTCTGGTACAATTAATCTTTCATCATACCTGAGTGTGTCCTCTCATAAGACAATTGATGGAAGAGGTCAGAGGATTAAATTGACTGGGAAAGGCTTAAGGCTGAAAGAATGTGAGAACATAATTGTATGCAACCTTGAGTTTGAAGGTGGTAGGGGTCATGATGTTGATGGGATTCAAATCAAACCAAATTCTACCAATATTTGGATCGACCGTTGCAGCCTCCGAGATTATGATGACGGCCTTATAGACATCACAAGACAAAGCACGGATATCACTATATCTAGATGTTACTTTGCCCAGCATGACAAGACCATGCTAATTGGAGCTGACCCAACACACGTTGGCGATAGATGCATCCGGGTGACGATTCATCATTGTTTCTTTGATGGAACGCGGCAAAGACACCCTCGTGTGCGATTTGGAAAGGTTCATCTGTACAACAATTACACCAGAAACTGGGGAATATATGCAGTTTGTGCTAGTGTTGAGTCCCAGATATACTCCCAATGCAACGTATATGAGGCAGGAGATAAGAAAAAGACTTTTGAATTTTATACTGAGAAGGCGGCAGACAAAGAAGAGCAGAAGTCTGGCTTCATAATATCTGAAGGAGATATGTTTCTGAATGGTGCTCAACCATGCTTGCCAATAGAATCTAAAGGAGAATCCATCTTCCATCCTAGTGAATATTACCCAACTTGGACAATGGAAGCAGCTACACATTCTCTTAGAGAGGTTGCCCAGTTTTGTACAGGTTGGCAGTCCATTTGTAGGCCAAATGGCCAATAG 981 0.4414 MMQPYGDADSSLRSIAGRAEGFGRLAIGGLHGALYFVTSLSDDGPGSLREGCRRKDPLWIVFEVSGTINLSSYLSVSSHKTIDGRGQRIKLTGKGLRLKECENIIVCNLEFEGGRGHDVDGIQIKPNSTNIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPTHVGDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNVYEAGDKKKTFEFYTEKAADKEEQKSGFIISEGDMFLNGAQPCLPIESKGESIFHPSEYYPTWTMEAATHSLREVAQFCTGWQSICRPNGQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04983 326 PRINTS Pollen allergen Amb family signature 198 217 IPR018082 -
Mepo4g04983 326 PRINTS Pollen allergen Amb family signature 18 35 IPR018082 -
Mepo4g04983 326 PRINTS Pollen allergen Amb family signature 220 239 IPR018082 -
Mepo4g04983 326 Pfam Pectate lyase 73 236 IPR002022 -
Mepo4g04983 326 SUPERFAMILY Pectin lyase-like 16 278 IPR011050 -
Mepo4g04983 326 Gene3D - 5 314 IPR012334 -
Mepo4g04983 326 SMART amb_all 65 243 IPR002022 -
Mepo4g04983 326 PANTHER PECTATE LYASE 18-RELATED 7 279 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04983 Mepo-Chr4 59032781 59034879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04983 42 324 Polysaccharide Lyase AT3G55140 80.212 2.00e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04983 K01728 - gmx:100802068 611.683