Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04982 ATGAATGAGAATAAGGCTTACTTGCTCGTAAAATTTAAGTTGCTTGTTCCTAAAGCCTCACACAAGGTTAGTTTTGCCTTGCCATCCAAGTCTAGAGGTTATCGGGCTCGGATGCCAAAGAGTTATTATATCTCAAGAACTACTGTTGAATTTTACTTGTGTGATGATGCTGACAATTCCCTTACTCGATACAAGGGTTTACAATTACATACAAGAGAGGCGCAGCCGCAGAAGCAGAAGAACCTCTTGAATTCAACAATGGCCAGGATCAAGCCTCACGAGTTAAGGCAGAAAACCAAACCTGATCTGTTGGCTCAGCTCAAAGACCTCAAAGCTGAACTCGCTTTGCTTCGTGTTGCCAAGGTCACTGGTGGTGCACCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCGATTGCTCAGGTGTTGACAGTGATTTCGCAGAAGCAGAAGGCTGCATTGAGGGAAGTTTACAAGAACAAGAAGTATTTGCCCCTTGATCTTCGCCCAAAGAAGACCAGGGCCATTCGCAGGAGACTCACCAAGCATCAGTCCTCATTGAAGACCGAGAGGGAAAAGAAAAAGGAGACATATTTCCCAATGAGGAAATATGCTATCAAGGCATAG 630 0.446 MNENKAYLLVKFKLLVPKASHKVSFALPSKSRGYRARMPKSYYISRTTVEFYLCDDADNSLTRYKGLQLHTREAQPQKQKNLLNSTMARIKPHELRQKTKPDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKETYFPMRKYAIKA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04982 209 Gene3D - 87 163 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mepo4g04982 209 SUPERFAMILY Ribosomal protein L29 (L29p) 90 151 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mepo4g04982 209 FunFam 60S ribosomal protein L35 164 209 - -
Mepo4g04982 209 Hamap 50S ribosomal protein L29 [rpmC]. 90 150 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mepo4g04982 209 FunFam 60S ribosomal protein L35 87 163 - -
Mepo4g04982 209 PANTHER 60S RIBOSOMAL PROTEIN L35 87 209 IPR045059 GO:0000463|GO:0022625
Mepo4g04982 209 CDD Ribosomal_L29_HIP 94 150 - -
Mepo4g04982 209 Gene3D - 164 209 - -
Mepo4g04982 209 Pfam Ribosomal L29 protein 94 150 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mepo4g04982 209 NCBIfam 50S ribosomal protein L29 94 150 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04982 Mepo-Chr4 59023793 59030392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04982 87 208 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 87.705 4.20e-70 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04982 K02918 - rvl:131314800 221.09