Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04958 ATGGCAATCTACAGAATAGCAATTGGGTCTCCTAGAGAGGCTAGCAATCCTGCTGCAATTAGAGCAGCCTTTGCAGAGTTCTTCTCTATGCTCATTTTTGTTTTTGCTGGCCAAGGCTCCGGCATGGCCTATAATAAACTTACAAACAATGGAGCTGCCACTCCTGAAGGTCTCATAGTTGCATCATTATCTCATGCATTTGGGTTATTTGTGGCTGTTTCTGTTGGTGCAAACATTTCTGGTGGACATGTGAACCCTGCAGTCACATTTGGTGCTTTCATTGGAGGAAACATTACCTTCTTGAGAAGTATTTTGTATTGGATTGCACAGTTACTTGGCGCAGTTGTTGCTTGCATTCTTCTCAATTCATGCACTGGTGGAATGGAAACATCAGCTTTTGCTCTATCCTCTGGTGTGTCTGTGTGGAATGCATTAGTTTTTGAGATTGTGATGACATTTGGATTGGTATATACAGTTTATGCAACAGCAATAGACCCAAAGAGAGGGAATGTTGGTGTTGTAGCACCATTAGCAATTGGTTGTGTTGTGGGTGCAAATATCTTGGTTGGTGGTGTATTTGATGGTGCATCAATGAACCCAGCTGTGTCATTTGGGCCTGCTGTGGTTAGTGGGACATGGACTCATCATTGGGTCTATTGGGTTGGCCCATTCATTGGTTCAGCTACTGCTGCCATTCTCTATGATAATATCTTCATTGGTGATGATGCTCATGAACCCCTCTCAAATAGTGACTTCTAG 759 0.4308 MAIYRIAIGSPREASNPAAIRAAFAEFFSMLIFVFAGQGSGMAYNKLTNNGAATPEGLIVASLSHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITFLRSILYWIAQLLGAVVACILLNSCTGGMETSAFALSSGVSVWNALVFEIVMTFGLVYTVYATAIDPKRGNVGVVAPLAIGCVVGANILVGGVFDGASMNPAVSFGPAVVSGTWTHHWVYWVGPFIGSATAAILYDNIFIGDDAHEPLSNSDF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04958 252 SUPERFAMILY Aquaporin-like 16 240 IPR023271 -
Mepo4g04958 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 PANTHER AQUAPORIN-8 6 246 IPR034294 -
Mepo4g04958 252 FunFam Probable aquaporin TIP1-1 4 251 - -
Mepo4g04958 252 Pfam Major intrinsic protein 15 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g04958 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Mepo4g04958 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04958 Mepo-Chr4 58834238 58835854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04958 1 252 Major Intrinsic Protein MIP AT4G01470 80.159 3.28e-146 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04958 K09873 - gmx:100818197 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04958 4 58834238 58835854 Mepo4g04958 4 58834238 58835854 ECH