Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g04954 | ATGGTTCTATCAAACAAAAAGCTTAAACAGAAGCTTAGAGCTGAATTAACCCTAAACCAGATTAACGCTGAATCTAATCCACCTTCTTCATCATCTTCAAACTCTCTTAAACTTCTTTTTAACTCTTCCACCAACAAACCCATTTTGTCTAAGAGAGAGAAACTCCGAAAGCTTCGACCTTTGCAACAAACTCAATCCAATGAAGATGAAGGAACCAAAAACGAGGAAATTGGGAATGAGGGTTTAGGAAAGAAGAAGAACAAAAAGAGGAAAATGAAGGTAGAAGAGAAAGAAGATGAATCAATTGAAAAGAAGGAGAAGCAAATGAAGAAGAAGAAGAAGAATGAAGATGGTGTGGCTAATGGGGTTGTGAAGAAGAGTAATGATGATGTGGCTAATGTGGTTATGAAGAAGAATGATGAAGATGTGGCTAATGGGGTTGTTGTTAAGGATGCAAAAAAATCAATGAAAAAGGAGAAGCAAAAGAAAAAGAATCAATTGAAGAAGAAGAGAAAGAAGAACAAAACTGCAGAGGAAAATGGTGAGGCCAAAATTGCAGAGGAGAGTGTTTCTAATCATCAAGAGGAAATGCCACAATCTACAGGATTGGCTAACACTAATACCACTACAAGTCAAGAAAATGGTGATGTTGCTACAAAAGTTTATGTTGGAGGAATACCCTACTATTCAAGTGAGGATGACATTCGAAGTTATTTTGAAGGCTGTGGCACCATCACTGAAATTAATTGCATGACTTTTCCTGACACTGGCAAGTTTAGAGGGATTGCAATAATTAGTTTTAAGACTGAAGCAGCGGCCAAACGAGCATTGGCTCTTGATGGATCTGACATGGGAGGACTCTTTCTTAAAATTCAACCATGCAAAGCAACTCAAGCAACCCGATTTACTCCAGAAATGAAGGAGGGATATAATAGAATATATGTTGGAAGTTTGTCATGGGAAATAACAGAGGAAGAACTAAGGAAATTCTTCTCAAATTGCAATGTAAAGGCCATACGACTTGGTATGGACAAGGAAACAGGAGAATTTCGAGGGTATGCTCACGTTGATTTCGGTGATAGTCAGTCACTGAAGACAGCACTTGCATTGGACCAAAGTGTCTTGTTTGGAAGGCCTGTCAGGATAAGTTGTGCGGTTCCTTTGAACAAAAAACCAGTTGCAGGTTCCAAACCAGTTGCAGGTTCTAAACCAGGTGCAGGTGAAAAATCAGTTGCAGTTGAAAAACCAGGTGCAGGTGAAAAATCAATTGCAGTTGAAAAACCAGGTGCAGGTGAAAAATCAGTTGCAGTTGAAAAATCAGGTGCTGGTGAAAAATCATTTGCAGGTGAGCAACCAGGTGCAGGCGGAAAACTAACTGTTGAGCAACCAAGTTCTGTTGCAAGTGGCAAGAGGAAGAATAGGATGTGCTACGGCTGTCGTCAAAAAGGACATAATCTCTCAGAATGCCCAAACCCACAAATAGTTGCTTCTGCTGCACTTTGA | 1503 | 0.3972 | MVLSNKKLKQKLRAELTLNQINAESNPPSSSSSNSLKLLFNSSTNKPILSKREKLRKLRPLQQTQSNEDEGTKNEEIGNEGLGKKKNKKRKMKVEEKEDESIEKKEKQMKKKKKNEDGVANGVVKKSNDDVANVVMKKNDEDVANGVVVKDAKKSMKKEKQKKKNQLKKKRKKNKTAEENGEAKIAEESVSNHQEEMPQSTGLANTNTTTSQENGDVATKVYVGGIPYYSSEDDIRSYFEGCGTITEINCMTFPDTGKFRGIAIISFKTEAAAKRALALDGSDMGGLFLKIQPCKATQATRFTPEMKEGYNRIYVGSLSWEITEEELRKFFSNCNVKAIRLGMDKETGEFRGYAHVDFGDSQSLKTALALDQSVLFGRPVRISCAVPLNKKPVAGSKPVAGSKPGAGEKSVAVEKPGAGEKSIAVEKPGAGEKSVAVEKSGAGEKSFAGEQPGAGGKLTVEQPSSVASGKRKNRMCYGCRQKGHNLSECPNPQIVASAAL | 500 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 192 | 212 | - | - | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 393 | 472 | - | - | |
Mepo4g04954 | 500 | SUPERFAMILY | Retrovirus zinc finger-like domains | 468 | 492 | IPR036875 | GO:0003676|GO:0008270 | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 92 | 120 | - | - | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 156 | 171 | - | - | |
Mepo4g04954 | 500 | Coils | Coil | 85 | 115 | - | - | |
Mepo4g04954 | 500 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 311 | 387 | IPR000504 | GO:0003723 | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 69 | 83 | - | - | |
Mepo4g04954 | 500 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 97 | 295 | - | - | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 146 | 212 | - | - | |
Mepo4g04954 | 500 | Gene3D | - | 137 | 300 | IPR012677 | - | |
Mepo4g04954 | 500 | Gene3D | - | 301 | 392 | IPR012677 | - | |
Mepo4g04954 | 500 | Coils | Coil | 149 | 180 | - | - | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 172 | 191 | - | - | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 44 | 132 | - | - | |
Mepo4g04954 | 500 | MobiDBLite | consensus disorder prediction | 19 | 38 | - | - | |
Mepo4g04954 | 500 | CDD | RRM1_PHIP1 | 221 | 292 | IPR034361 | - | |
Mepo4g04954 | 500 | SMART | rrm1_1 | 312 | 383 | IPR000504 | GO:0003723 | |
Mepo4g04954 | 500 | SMART | rrm1_1 | 220 | 292 | IPR000504 | GO:0003723 | |
Mepo4g04954 | 500 | SUPERFAMILY | RNA-binding domain, RBD | 304 | 401 | IPR035979 | GO:0003676 | |
Mepo4g04954 | 500 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 219 | 296 | IPR000504 | GO:0003723 | |
Mepo4g04954 | 500 | ProSiteProfiles | Zinc finger CCHC-type profile. | 476 | 491 | IPR001878 | GO:0003676|GO:0008270 | |
Mepo4g04954 | 500 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 221 | 287 | IPR000504 | GO:0003723 | |
Mepo4g04954 | 500 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 313 | 380 | IPR000504 | GO:0003723 | |
Mepo4g04954 | 500 | SUPERFAMILY | RNA-binding domain, RBD | 202 | 300 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g04954 | Mepo-Chr4 | 58806607 | 58809842 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g04954 | 219 | 385 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 26.923 | 2.06e-06 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g04954 | - | - | mtr:25485710 | 751.125 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo4g04954 | 4 | 58806607 | 58809842 | Mepo4g04954 | 4 | 58806607 | 58809842 | ECH |