Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g04951 | ATGAAGAGAGAAAGAGAAGTTGATAATAACATAGCCATGGCTAAATACTTGATGTTACTTTCTGGTGGAGGTGATCAAATATTTGATCAAGTGAATTACTCTTCAAATTTCAACAACCGTGTGTTTGAGTGCAAGACATGTAAAAGACAATTTTCATCGTTTCAAGCGTTGGGAGGACACCGTGCAAGTCACAAGAAACCGAGGTTGATGGAGATGACTAGTGATGATCATCATGGTTCAATACTTACACCAACGACGAAGACTAAAACACATGCATGTTCCATTTGTGGATTAGAATTTGGAATAGGACAAGCTTTGGGTGGTCACATGAGGCGACACAGAAGAACAGAATCATCAAAACTCAAAGCTAATAATTCAAATGGAAACATGCATAATTTTATGACTACTACAACTACTAGTAGTAGCAATAGTGGTTGCAGTACTATTGATAATAGTACTAATACTGATTCAGCAAAGAGGAACAGCAACAGATTTTTGTTTCTGGATTTGAATTTGACACCTTTAGAGAATGATTTGAAGTTTTTAAAGGTTGGACAACCAACTCCTAATTTGGTAGATTGTTTCAATTCAGTTCATTAA | 600 | 0.3583 | MKREREVDNNIAMAKYLMLLSGGGDQIFDQVNYSSNFNNRVFECKTCKRQFSSFQALGGHRASHKKPRLMEMTSDDHHGSILTPTTKTKTHACSICGLEFGIGQALGGHMRRHRRTESSKLKANNSNGNMHNFMTTTTTSSSNSGCSTIDNSTNTDSAKRNSNRFLFLDLNLTPLENDLKFLKVGQPTPNLVDCFNSVH | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g04951 | 199 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 91 | 118 | IPR013087 | - | |
Mepo4g04951 | 199 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 44 | 64 | IPR013087 | - | |
Mepo4g04951 | 199 | Gene3D | Classic Zinc Finger | 40 | 113 | - | - | |
Mepo4g04951 | 199 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 13 | 178 | - | - | |
Mepo4g04951 | 199 | SMART | c2h2final6 | 91 | 113 | IPR013087 | - | |
Mepo4g04951 | 199 | SMART | c2h2final6 | 42 | 64 | IPR013087 | - | |
Mepo4g04951 | 199 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 93 | 113 | IPR013087 | - | |
Mepo4g04951 | 199 | SUPERFAMILY | beta-beta-alpha zinc fingers | 40 | 113 | IPR036236 | - | |
Mepo4g04951 | 199 | MobiDBLite | consensus disorder prediction | 136 | 157 | - | - | |
Mepo4g04951 | 199 | Pfam | C2H2-type zinc finger | 41 | 67 | - | - | |
Mepo4g04951 | 199 | Pfam | C2H2-type zinc finger | 91 | 115 | - | - | |
Mepo4g04951 | 199 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 42 | 69 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g04951 | Mepo-Chr4 | 58780488 | 58781307 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g04951 | 1 | 182 | C2H2 Transcription Factor Family | AT2G37430 | 43.085 | 2.58e-33 | 115 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mepo4g04951 | zf-C2H2_6 | 5.7e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g04951 | - | - | psat:127098085 | 270.396 |