Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04951 ATGAAGAGAGAAAGAGAAGTTGATAATAACATAGCCATGGCTAAATACTTGATGTTACTTTCTGGTGGAGGTGATCAAATATTTGATCAAGTGAATTACTCTTCAAATTTCAACAACCGTGTGTTTGAGTGCAAGACATGTAAAAGACAATTTTCATCGTTTCAAGCGTTGGGAGGACACCGTGCAAGTCACAAGAAACCGAGGTTGATGGAGATGACTAGTGATGATCATCATGGTTCAATACTTACACCAACGACGAAGACTAAAACACATGCATGTTCCATTTGTGGATTAGAATTTGGAATAGGACAAGCTTTGGGTGGTCACATGAGGCGACACAGAAGAACAGAATCATCAAAACTCAAAGCTAATAATTCAAATGGAAACATGCATAATTTTATGACTACTACAACTACTAGTAGTAGCAATAGTGGTTGCAGTACTATTGATAATAGTACTAATACTGATTCAGCAAAGAGGAACAGCAACAGATTTTTGTTTCTGGATTTGAATTTGACACCTTTAGAGAATGATTTGAAGTTTTTAAAGGTTGGACAACCAACTCCTAATTTGGTAGATTGTTTCAATTCAGTTCATTAA 600 0.3583 MKREREVDNNIAMAKYLMLLSGGGDQIFDQVNYSSNFNNRVFECKTCKRQFSSFQALGGHRASHKKPRLMEMTSDDHHGSILTPTTKTKTHACSICGLEFGIGQALGGHMRRHRRTESSKLKANNSNGNMHNFMTTTTTSSSNSGCSTIDNSTNTDSAKRNSNRFLFLDLNLTPLENDLKFLKVGQPTPNLVDCFNSVH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04951 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Mepo4g04951 199 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Mepo4g04951 199 Gene3D Classic Zinc Finger 40 113 - -
Mepo4g04951 199 PANTHER ZINC FINGER PROTEIN ZAT5 13 178 - -
Mepo4g04951 199 SMART c2h2final6 91 113 IPR013087 -
Mepo4g04951 199 SMART c2h2final6 42 64 IPR013087 -
Mepo4g04951 199 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Mepo4g04951 199 SUPERFAMILY beta-beta-alpha zinc fingers 40 113 IPR036236 -
Mepo4g04951 199 MobiDBLite consensus disorder prediction 136 157 - -
Mepo4g04951 199 Pfam C2H2-type zinc finger 41 67 - -
Mepo4g04951 199 Pfam C2H2-type zinc finger 91 115 - -
Mepo4g04951 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04951 Mepo-Chr4 58780488 58781307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04951 1 182 C2H2 Transcription Factor Family AT2G37430 43.085 2.58e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g04951 zf-C2H2_6 5.7e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04951 - - psat:127098085 270.396