Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04946 ATGGTGAACATGATGGAATGGCAGAAACAACAAGTACAGAATGGGAATGTCGAAGCGATGTATGTTAAGGTGATGACTGATGAACAATTGGAAACTCTGAGGAAACAAATTGCTGTTTATGCCACCATTTGTGAACAACTTGTTGAGATGCATAAAACACTCTCTGCTCAACAAGATCTTGCAGGGGTTAGGCTGGGGAATTTATACTGCGACTCATTGATGACAGCTGGTCACAAAATCACATCCAGACAGAGGTGGACTCCTACACCGGTTCAGCTCCAGATTCTTGAGCGTATATTCGATCAGGGAAATGGAACTCCAAGCAAAGAAAAAATCAAGGAGATTGCTACTGAACTCAGCCAGCATGGTCAAATTTCTGAAACAAATGTTTATAATTGGTTCCAAAATAGGCGTGCAAGATCGAAAAGAAAAATGCAAAATGGGGGAACTAGTAACACTGAATCAGAGGTAGAGACTGAGGTTGACTCCAAGGATAAGAAGACAAAACCAGAGGAATTTCATTCTCAACAAAATGCTGCTCTAGGGGATGAAAATTTGTGCTTCCAGAACCAAGAAAAATGCTCTGAATTACAGTACTTGAATCATGATTCTAACAAAACATATTCCGTGTTTCCATCGGATGGCGGTATAAGATCCACAAGAAATTTGAGTGGCGTGTCTCTTTATGATGAAGTGCTATCAAACTCAAGGAATGACTATCTAGGAAAAATGGAAGTATCAGGGAGTTACAATATATACCAGCAAGCAGAGGACTACAATTTGGCAGGTTGA 792 0.4028 MVNMMEWQKQQVQNGNVEAMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLSAQQDLAGVRLGNLYCDSLMTAGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQHGQISETNVYNWFQNRRARSKRKMQNGGTSNTESEVETEVDSKDKKTKPEEFHSQQNAALGDENLCFQNQEKCSELQYLNHDSNKTYSVFPSDGGIRSTRNLSGVSLYDEVLSNSRNDYLGKMEVSGSYNIYQQAEDYNLAG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04946 263 SMART HOX_1 81 148 IPR001356 GO:0003677
Mepo4g04946 263 MobiDBLite consensus disorder prediction 141 170 - -
Mepo4g04946 263 CDD homeodomain 83 145 IPR001356 GO:0003677
Mepo4g04946 263 Pfam Homeodomain 83 143 IPR001356 GO:0003677
Mepo4g04946 263 Gene3D - 85 149 - -
Mepo4g04946 263 PANTHER WUSCHEL-RELATED HOMEOBOX 13 6 261 IPR044559 GO:0003700
Mepo4g04946 263 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Mepo4g04946 263 SUPERFAMILY Homeodomain-like 82 146 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04946 Mepo-Chr4 58732225 58735219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04946 20 263 Wox Gene Family AT4G35550 53.759 6.34e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo4g04946 Homeodomain 3.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04946 - - pvu:PHAVU_007G011600g 372.859