Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04890 ATGGCGGAGGAAGAGAACAATGACATAGTCACGTATATAGTGAAAATCAAAGTCACACTCACCGTCCCGGACCTAGACGAACCCATTCCTGAACATGATCATCGAGAAACACAACCTACTGCCAATGTTGGCCCGGAAACGGTACCGTTGGAGGATGGTGACGTGGCACAAGCTATCGGTGTTGGAGCTGAAACGGCGTCGTTGAAGGACGATGAACGTGATGACGTGGTGGAAGCAGCTGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGGACGTTGGCGCCAAAACGGTGGTGTTGTTGTCGACGGATGATGAAGGTTCCGTTGAAGCTGATGACATGGTAGCTAAGGATTCTGATGAAAACAATGCTGCACAAGTGGGTGAAGAAAATGTCATGAAAGAGAAGAAGAGAGCTGGTAGAAAAAGAAAAAAGGGAGGGTTTTCTTCCGGTTGTGTGAGAAAGAGGGAAAGGCCTAGGAAGATTAAATCGTTGAAGGAAGATTACATTTCAGATTTGGAGGAGGATGTAAAGAAGTGGAAACGTGGTAGGAAGAAGAAGGTCGTGATCGAGATTTCTGATGAGAATGATGAAGCTGAACAAGAGGAGGAGAATGCGAAGACAGAGAAGAAGAAACCTGGTAGGAAGAGGAAGGAAATTTTTAGTTCTGAAGAAAACGATGAAGATGAACAAGAGGGGGAAAATGGTAAAAATGTTAAGATTGATGAGAATGAACTGATCGGTGAAAAGAATTTGGAAAGTGATGTTTTATCTGATGATGATAAAGGTTATTCTTTAAGGACTGATAGAAAAGCGAAAGTTAAAAGCATTGAACAGGCGAAGACAGCAAGCAAGAGATGGGATCCTAAGTGGATTGAAGAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGACAAGGGCAGGGTTGTCAGATGCACAAAATGCAAACGGAAAAGATTCTGCATACCTTGTTTAAACAACTGGTATCCTCACTTGAAAGAGGAAGAAATTGCTGAGGCATGTCCGGTGTGCTGTGGTAACTGCAATTGCAAAGCATGCTTGCGATCATCTGTACTTATTGAGGAAATTAAAACCAAGGTGGAAACCAATAACGACCATGAGGTTGAGCTCTCCATGTATATGTTGAAACAACTTCTGCCGTATTTAAGACGGTTGGATGAGGAGCAAATGGCTGAGAAGGAGATAGAAGCAAAGAGACAGGGGCTCTCCCTTTCTGAGGGAGATATTAATGTGCACCAATTCTTTACCGGGTACACAAAGGGTCGCCTGGATTGGCTCAACTGGCCTCAGGTTTTGAAACTGAAAGATTGGCCTCCGTCTAATTTATTTGAGGAAAGTTTACCCCGTCATTGTGCCGAGTTCATATCATCCTTGCCGTTTAAAGAATATACAGATCCTTTCAAAGGTGTTCTAAACCTTGCTGTGAAGTTGCCTAAATCTGTTCTACAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGTTTGGGCGGGGTGATTCTGTCACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTAAAATTGGAAACTAAAGGAATGGATGCCATTAAGAAACTGAAACTAGCGCACCTTAAGCAAGACAAGAGGGAGTGGCATTGTGATAATCGGGATGGTGAGACCAACATTGACATGCTTGATAATTCATCTTCTTTGATAAATGCTTCAGACGGGCAAAATAGCGTTCAAGTCGTGGAAAATGGAAGTGGATTATGTGATGCTAAAGTGGTTGATCCAGTTCATGAGTACTCCGGTGGTGCTGATGATGATGGGGGCGATTCTTTAGTTGGTGCTCTCTGGGACATTTTTCGGAGAGAGGATGTACCTAAGTTGGAGGAATATTTAAAGAAGCATTTCAGGGAGTTTAGGCATGTCCATTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGATCAGCACTTTTACCTGACTATCGAGCATAAGAAGAGGCTTAAGGAGGAGTATGGAATAGAACCTTGGACTTTTTTTCAGAAGCTGGGAGATGCTGTTTTTATTCCAGCTGGTTGTCCGCATCAAGTCCGAAATCTTAAGTCATGCACCAAGGTTGCGCTTGATTTTGTTTCTCCTGAAAATGTTGGTGAGTGCTTTCGTTTGACAGAGGAATTCCGTAAACTTCCAGTAAATCACAGGTCTGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATATATGCTATGCTTGATCTGGTCAAGAATTTGAAGAAAGCAAGGTCTGGCGAAACCAAGGTGCCAGTGTAA 2346 0.4288 MAEEENNDIVTYIVKIKVTLTVPDLDEPIPEHDHRETQPTANVGPETVPLEDGDVAQAIGVGAETASLKDDERDDVVEAAEESVPDREKQAMDVGAKTVVLLSTDDEGSVEADDMVAKDSDENNAAQVGEENVMKEKKRAGRKRKKGGFSSGCVRKRERPRKIKSLKEDYISDLEEDVKKWKRGRKKKVVIEISDENDEAEQEEENAKTEKKKPGRKRKEIFSSEENDEDEQEGENGKNVKIDENELIGEKNLESDVLSDDDKGYSLRTDRKAKVKSIEQAKTASKRWDPKWIEEESLMCHQCQRNDKGRVVRCTKCKRKRFCIPCLNNWYPHLKEEEIAEACPVCCGNCNCKACLRSSVLIEEIKTKVETNNDHEVELSMYMLKQLLPYLRRLDEEQMAEKEIEAKRQGLSLSEGDINVHQFFTGYTKGRLDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPFKEYTDPFKGVLNLAVKLPKSVLQPDMGPKTYIAYGFAQEFGRGDSVTKLHCDMSDAVNVLTHIAEVKLETKGMDAIKKLKLAHLKQDKREWHCDNRDGETNIDMLDNSSSLINASDGQNSVQVVENGSGLCDAKVVDPVHEYSGGADDDGGDSLVGALWDIFRREDVPKLEEYLKKHFREFRHVHCSPLKQVIHPIHDQHFYLTIEHKKRLKEEYGIEPWTFFQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPVNHRSAEDKLEVKKMIIYAMLDLVKNLKKARSGETKVPV 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04890 781 MobiDBLite consensus disorder prediction 63 169 - -
Mepo4g04890 781 MobiDBLite consensus disorder prediction 66 93 - -
Mepo4g04890 781 ProSiteProfiles JmjC domain profile. 475 739 IPR003347 -
Mepo4g04890 781 Coils Coil 186 213 - -
Mepo4g04890 781 ProSiteProfiles Zinc finger RING-type profile. 300 346 IPR001841 -
Mepo4g04890 781 MobiDBLite consensus disorder prediction 190 246 - -
Mepo4g04890 781 SMART cupin_9 456 739 IPR003347 -
Mepo4g04890 781 MobiDBLite consensus disorder prediction 151 169 - -
Mepo4g04890 781 Gene3D Cupin 360 748 - -
Mepo4g04890 781 MobiDBLite consensus disorder prediction 204 225 - -
Mepo4g04890 781 MobiDBLite consensus disorder prediction 25 50 - -
Mepo4g04890 781 Pfam JmjC domain, hydroxylase 624 722 IPR003347 -
Mepo4g04890 781 SUPERFAMILY Clavaminate synthase-like 434 760 - -
Mepo4g04890 781 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 415 774 IPR045109 GO:0032454|GO:0033169
Mepo4g04890 781 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 295 359 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04890 Mepo-Chr4 58196017 58225148 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo4g04890 JmjC 5.7e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04890 K15601 - fve:101297357 601.668