Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04888 ATGGCGGAGGAAGAGAACAACCACATAGTCGCATATATAGTGAAAATCAAAGTCACACTCACCGTCCCGGACCCAGATGAACCCATTCCTCATCGTGATCATCGAGAAACACAACCTACTGCCAATGTTGGCGCGGAAACGGTACCGTTGAAGGGTGATGACGTGGCACAAGCTATCGGTGTTGGAGCTGAAACGGCGTCGTTGAAGGTTGATGAACGTGATGACGTGGTGGAAGCAGCTGAAGAATCTATTCCTGATCGAGAAAAACAAGCCATGAATGTTGGCGCCAAAACGGTGGTGTCGCTGTTGAAGCACGATGATGAAGGTTCGGTTGAAGGTGATGACATTGCAGCTAGGGATTCATCCTCCGGTAAAGCTGCGGAGGCGATAATGAAATGCGGCAGAAAGAAAAAGAAACGCGGAAGAAAGAGTTTTGCAGAAATTGAAAAGATGAAGAGGGATGAAGAAGCGTTGTTAGGGAACAAAATAAAGGAAGAAACTGGTGAAGGTGATAATGATGTGGCAGCTGGAGGCTCTTCATCATTTCAACTGAAGAGAAAGAGACGCGGCAGAAAGAGAAAGGCGGCGAAGGAAACCACCGAAAATGAGGTTCCACAAGTCCATAAGAAACTTAAAATCAGCGAGAGTAATGCTAAGGAAATGAAGCGTAAGGCTGAAACCAACAACGAGGAGGAGGTTGAGTTCTCTAAGTATCTGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGAATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAGAGACGAGGGCTCTCACTCTCAAAGCTAAATATAAAACCGGCTGATTATTCTAAATACGAGCGTGTGTTCTGTGACAACTGCAAAACATCAATATTTGACTACCATAGAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCCTCTGTTGCTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATTGAGCTCGAGTATATTTTCCGAGGTCGCGATTATCTACATGGTGGAAATGAAGATAAACAGGGAGATATTAATATCCACCAATTCTTCACTGGGTACACAAATGGTCGCAGCGATTGGCTTAAATGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACTTTTACCTCGTCATCATGCTGAGTTCATCTCTTCCTTGCCTTATAAAGAATATACAGATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTGTAAAGCCTGACATGGGGCCAAGAACATATATTGCTTATGGATTTGCTCAGGATCTTGGACGCGGTGATTCCGTGACTAAGCTCCATTGTGATGTGTCTGATGCAGTAAATGTGTTGACACATATCGCTGAAGTGGAACTGAAACCTGAGGAAATTAGTGTCATTAAGAAATTGACACGTAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTGACGGGGAGGCTGTTGATATATTTCACCAACACTCTGACACTAATGATGGTGACCTGGTGGTTGGAGGGGATCCCTTAGAAGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCCAAATTGAAGGAATATCTAAAGAAGCATTTCAGAGAGTTCAGACATGTCAATTGCATTCCTTTAAAGCAGGTTATTGACCCCATTCATGATCAGACCATTTATCTGACTATGGAGCATAAGATGAAACTTAAGAAAGAGTATGGAATTGAGCCTTGGACTTTTATTCAGAAGTTGGGAGATGCTGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCCGAACATATTGGTGAGTGCTTCCGTTTGACAGAGGAATTCCGCAAGCTTCCGATAAATCACAGATCCGCCGAGGACAAGTTTGAGGTGAAGAAAATTGCCATACATGCTATGCTTGATGTGGTTGAAAAATTAGAGAAAGCAAGGTCTGGGAAAGCCATGGTTTGTGCGTAA 2040 0.4382 MAEEENNHIVAYIVKIKVTLTVPDPDEPIPHRDHRETQPTANVGAETVPLKGDDVAQAIGVGAETASLKVDERDDVVEAAEESIPDREKQAMNVGAKTVVSLLKHDDEGSVEGDDIAARDSSSGKAAEAIMKCGRKKKKRGRKSFAEIEKMKRDEEALLGNKIKEETGEGDNDVAAGGSSSFQLKRKRRGRKRKAAKETTENEVPQVHKKLKISESNAKEMKRKAETNNEEEVEFSKYLLKGLLPHLRRLNEEQMIEKEREAKRRGLSLSKLNIKPADYSKYERVFCDNCKTSIFDYHRSCTKCSFDLCLLCCCELRGGKLLGGADPIELEYIFRGRDYLHGGNEDKQGDINIHQFFTGYTNGRSDWLKWPEVLKLKDWPPSDLFQELLPRHHAEFISSLPYKEYTDPFSGSLNLAVKLPDYCVKPDMGPRTYIAYGFAQDLGRGDSVTKLHCDVSDAVNVLTHIAEVELKPEEISVIKKLTRKHLEQDKRELHGDGEAVDIFHQHSDTNDGDLVVGGDPLEGALWDIFRREDVPKLKEYLKKHFREFRHVNCIPLKQVIDPIHDQTIYLTMEHKMKLKKEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKSCIKVALDFVSPEHIGECFRLTEEFRKLPINHRSAEDKFEVKKIAIHAMLDVVEKLEKARSGKAMVCA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04888 679 ProSiteProfiles JmjC domain profile. 408 637 IPR003347 -
Mepo4g04888 679 Gene3D Cupin 340 646 - -
Mepo4g04888 679 SUPERFAMILY Clavaminate synthase-like 356 662 - -
Mepo4g04888 679 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 348 672 IPR045109 GO:0032454|GO:0033169
Mepo4g04888 679 SMART cupin_9 389 637 IPR003347 -
Mepo4g04888 679 MobiDBLite consensus disorder prediction 165 227 - -
Mepo4g04888 679 MobiDBLite consensus disorder prediction 195 227 - -
Mepo4g04888 679 Pfam JmjC domain, hydroxylase 524 620 IPR003347 -
Mepo4g04888 679 Coils Coil 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04888 Mepo-Chr4 58176477 58184743 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo4g04888 JmjC 1.4e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04888 K15601 - gmx:100805723 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04888 4 58176477 58184743 Mepo4g04888 4 58176477 58184743 ECH