Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04880 ATGCAAACTATTAAAAAATCCTTCAAATCTTATGCTTCTCAAAACAATAAACATTCCAGAAAATTTTCTGCAGATTCCGACCACGAACAGCTCCCTATTCTCCACGACCGCCAACACAGCAGCCGCTCTTTTCCTATGGCCGGCGACGTCGTCGTGAAAATCAACGACGACGGTGGTGAACCTTCCCATGCCAATAACAAGATTTGGAGAGAATCTAGCTACGATTTCTGGAATGACACCGGCGACAATGTTCGTGATGAGAGTTTTGATTTCCGCCACAAAGCTAAGCTTGAGGATCCACCGTCGCAACTAATCGGAAAATTTCTTCATAAACAGCGTGCCTCCGGTGATATGTCTTTGGATATGGATTTGGAGATGGAAGAGCTGCAGAATGAAGGTAATGCCGGTGACGGCAAGTTAACGCCGGTGGATGAATCTCCCACGGTGATTCAACGCGAGTTAAAAGTTAGTTTCGAGGAACCAGCTTCGAATTCAAATGGGATTGAAGCCGTGAACGATCCTGTTCGTAGAAGACATAGCAAAGACTCGCCGTCAATGGGTGAGTATTCCCTGCCTCCACAACCCCCTAATCACGACCGTCGTCGTTCTCCATCACCGGCGGGTAATGGTGGTGGTGATTGCGAGGTTTTGAGGTGTTCCTCCAATGCTTCGTTTGAGAGGAACCTCTCCATGCAGAGAAAATCAACGTTAATGAAAACTAAAACTAAGTCTAGATTAATGGACCCACCTGATGAACCGGATAGAAGATCTGGTCGGGTTGCTAAATCGAGTCAGCTTTTGTCCGGGATGATTGGGAGGAAAGGTGATGATGATGAAGATGATCCTTTTATGGAAGAAGATTTTCCAGATGAGTATAAGAAAACACATTTTAGTCTTTGGATCCTTCTTGAATGGTTGAGTTTGATTTTAATTATTGGTGCATCAGTAACAACTTTTTGTGTTCCTTTGTTGAGGGAGAGGAAACTGTGGCAGCTTAAGTTGTGGAAATGGGAAGTGATGATTCTTGTTCTAATATGTGGTAGATTGGTTTCTGATTGGGTTATTAGGATTGCTGTGTTTTGTATTGAAAGGAATTTCCTATTGAGAAAGAGGGTTCTTTATTTTGTGTATGGTGTCAGGAAAGCTGTGCAAAATTGTGTTTGGTTAGGGCTTGTTTTGATTGCATGGCATTTTCTGTTTGATAAGAGAGTTCAAAGAGAGACAAACAGTGATGTCCTTCAATATGTGACTAAGGTTTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGTTGAAAACTCTAGTGGTTAAGGTTTTAGCTTCTTCTTTTCATGTGAGTACATACTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTGATCGAAACACTCTCGGGGCCGCCTTTGGTGGAGATTCGAAAGGCGGAAGAGGAAGAGGAAAGGCTTGCTGATGAGGTTCAGAAGTTGCAGAATGCCGGTGTTAGCATACCTGCTGACCTAAGAGCTAGTGCCTTTCCTAACATCAAGAGTGGAAGGTTGAGGAGTGGAATGCTTCAGAAAAGCCCTGTGGTTAAAAGTGGCAAGTTTTCAATGCCACTTTCCAAGAAATCTGATGATAATGGGATTGGGAATGGTGGTGGTGGGATAACTATTGATCACCTGCACAAGCTTAATCCAAATAACGTGTCCGCTTGGAATATGAAGAGGTTAATGAATATGGTTCGGCATGGGGCACTTACTACATTGGATGAGCAGATACTTGATTCTTCTGCTGATGATGAGCATGCCACGCAAATCAGAAGTGAAAATGAGGCTAAAGCAGCTGCTAAGAAAATCTTTCAGAATGTTGCTAGGCGCGGCTGCAGGTTTATATATCCTGAGGACTTAATGCGTTTTATGCGAGAAGATGAGGCTATAAAAACCATAAATCTATTTGAAGGAGCGTCTGATTCTGGGAAAATCAGCAAATCCGCGTTGAAGAATTGGGTGGTGAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACCGCAGTGAACAAACTTCATCGAATGCTCAATTTCTTAGTTGCCATTATCATACTGGTTATTTGGCTCTTGATATTGGAAATTGCTACTACCAAATTTCTTCTTTTTGTGAGCTCGCAACTTGTCTTGGTTGCATTTATATTCGGAAACACATGCAAGACTGTATTTGAAGCAATCATATTTTTATTTGTAATGCATCCATTTGATGTGGGAGATAGATGTGAAATTGATGCGACCCAGATGGTTGTAGAAGAGATGAACATCTTGACCACCGTATTTCTAAGATTCGATAATCAAAAGATAACGATCCCTAACAGTGTCCTTGCTACTAAGGCCATACATAATTTCTACCGTAGTCCTGACATGGGAGATTCTATTGAATTCTGTATCCATGTAGCTACCCCACCTGAAAAGATTTCACTCATGAAACACAGAATACATAATTTCGTTGATAACAAGAAGGAGCACTGGTATCCTTCACCGTTTATAGTCTTGAAGGATCACGAACAATTGAACATGGTTAAAGTGGCGATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGATATATCAGGAGGTCTCTTCTTATTGAAGAGTTGATGAAGATTTTCAGGGATCTCGACATTCAGTACCGTCTCATGCCTCTCGACATTAATGTTAGAGCTTTGCCTACCACTTCTGATCGTCTTCCAGCTAGTTGGACAACAATCACAAATTGA 2778 0.4197 MQTIKKSFKSYASQNNKHSRKFSADSDHEQLPILHDRQHSSRSFPMAGDVVVKINDDGGEPSHANNKIWRESSYDFWNDTGDNVRDESFDFRHKAKLEDPPSQLIGKFLHKQRASGDMSLDMDLEMEELQNEGNAGDGKLTPVDESPTVIQRELKVSFEEPASNSNGIEAVNDPVRRRHSKDSPSMGEYSLPPQPPNHDRRRSPSPAGNGGGDCEVLRCSSNASFERNLSMQRKSTLMKTKTKSRLMDPPDEPDRRSGRVAKSSQLLSGMIGRKGDDDEDDPFMEEDFPDEYKKTHFSLWILLEWLSLILIIGASVTTFCVPLLRERKLWQLKLWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKRVQRETNSDVLQYVTKVLVCFLVGTLVWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLADEVQKLQNAGVSIPADLRASAFPNIKSGRLRSGMLQKSPVVKSGKFSMPLSKKSDDNGIGNGGGGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDSSADDEHATQIRSENEAKAAAKKIFQNVARRGCRFIYPEDLMRFMREDEAIKTINLFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDATQMVVEEMNILTTVFLRFDNQKITIPNSVLATKAIHNFYRSPDMGDSIEFCIHVATPPEKISLMKHRIHNFVDNKKEHWYPSPFIVLKDHEQLNMVKVAIWPTHRMNFQDMGERYIRRSLLIEELMKIFRDLDIQYRLMPLDINVRALPTTSDRLPASWTTITN 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04880 925 MobiDBLite consensus disorder prediction 244 259 - -
Mepo4g04880 925 PIRSF Memb_At2g17000 27 925 IPR016688 -
Mepo4g04880 925 Gene3D - 750 799 IPR023408 -
Mepo4g04880 925 SUPERFAMILY Sm-like ribonucleoproteins 740 799 IPR010920 -
Mepo4g04880 925 MobiDBLite consensus disorder prediction 228 262 - -
Mepo4g04880 925 Coils Coil 474 494 - -
Mepo4g04880 925 MobiDBLite consensus disorder prediction 156 215 - -
Mepo4g04880 925 Pfam Mechanosensitive ion channel 692 895 IPR006685 GO:0016020|GO:0055085
Mepo4g04880 925 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 45 920 IPR016688 -
Mepo4g04880 925 MobiDBLite consensus disorder prediction 1 30 - -
Mepo4g04880 925 MobiDBLite consensus disorder prediction 1 19 - -
Mepo4g04880 925 FunFam Predicted mechanosensitive ion channel 750 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04880 Mepo-Chr4 58092352 58096699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04880 49 922 Mechanosensitive Ion Channel Family AT1G78610 57.424 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04880 K22048 - gmx:102665658 1399.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04880 4 58092352 58096699 Mepo4g04880 4 58092352 58096699 ECH