Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04854 ATGAGTTTTGAATGCATCAAGTGCAAACAAAGTATTACACGTATATTTCCCGATGGAAAATTTTCACCGCCATCAACTTGCAATTTGAATGGCTGCAAAAGCAAAAATTTCAATCCATTGCGATCTACTGCTCAAACTATTGATTTTCAGAAAATAAGGGTTCAAGAATTATTAAAACATGAAGATCACGAGGAAGGACAAGTGCCTCGAGCAGTGGAATGTGAACTTACCCACGATCTTGTTGATTCATGCATTCCTGGAGATGTGGTGACGGTTACTGGAATTATTAGAGGAATTAACAATTACATGGATATTGGAGGAGGGAAGTCAAAGAACAGAAACCAAGGATTTTACTATTTGTATCTTGAAGCTGTATCCATAGTGAATTCAAAGTCACAGTCCATACCTGATGATTCACAAAGTTTTAATAAACGTAAAGGGCATGTCTAA 450 0.3667 MSFECIKCKQSITRIFPDGKFSPPSTCNLNGCKSKNFNPLRSTAQTIDFQKIRVQELLKHEDHEEGQVPRAVECELTHDLVDSCIPGDVVTVTGIIRGINNYMDIGGGKSKNRNQGFYYLYLEAVSIVNSKSQSIPDDSQSFNKRKGHV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04854 149 SUPERFAMILY Nucleic acid-binding proteins 2 100 IPR012340 -
Mepo4g04854 149 Pfam MCM OB domain 2 98 IPR033762 -
Mepo4g04854 149 Gene3D - 48 99 IPR012340 -
Mepo4g04854 149 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 141 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mepo4g04854 149 FunFam DNA helicase MCM8 isoform X1 1 48 - -
Mepo4g04854 149 Gene3D - 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04854 Mepo-Chr4 57889244 57890892 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04854 1 140 Core DNA Replication Machinery Family AT3G09660 72.857 6.91e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04854 K10737 - gmx:100784549 262.692