Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04849 ATGAGTCGTCATTCCTGTTCTTTAAAGCAAAAACTAAAAAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAACTTTTCAATTACATAACCATGTTTGGTGTTGGATGTTGGAGTTCAGTTCCTAAACTAGCTGGGTTGCAAAGGTGTGGAAAGAGCTGTAGATTGAGATGGATAAACTATTTGAGGCCTGATTTGAAGAGAGGAATGTTCTCAAAACAAGAGGAAGATCTTATCGTCAATCTTCATGAAGCACTTGGAAATAGGTGGGCTCAAATTGCATCACAATTACCAGGGAGAACAGATAATGAGATAAAAAAATTTTGGAATTCAAGTTTGAAGAAGAAACTAATGAAACAAGGGATTGATCCAGCTACACATAAACCCTTGATCAATAATGAATCTCTTGTAAAGGAAGAGAAGGAAAAACCATCAATGATAATGCCACTGTCTCTATCTCAACCTCAAAGGACTTTAGCTACACACACAATGCTAGAATCCTCACATGAATATTCAGAAGCACTTCTAATGAGTGATTCAATTAATCACTATAATATTGGTGGATCATCTTTAACAGAAGGTTCAAGAAAATTTCTTATGAATAAGCCAACATTTGATATTGATCCATTGAACTACAATTTAAGTATGAGTAATTATTATCAACCAAGTCAATTACAATTTGAACAGAATCAATTCTTCTCTTCAATGCCTTGTCTAAATAGTTCAGAATTTTCAGACAACATCAACAACAACTCATTTTCCAAATTTAGTTCTCCTTTGATGAATATTGAAAGTGATCGTGATTATTATCAAATGAGCAACGTGATTAATGAAAATTACAATAAGCTGTTGGATCCTTTGTTGCAGTTTTAA 870 0.3356 MSRHSCSLKQKLKKGLWSPEEDEKLFNYITMFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSKQEEDLIVNLHEALGNRWAQIASQLPGRTDNEIKKFWNSSLKKKLMKQGIDPATHKPLINNESLVKEEKEKPSMIMPLSLSQPQRTLATHTMLESSHEYSEALLMSDSINHYNIGGSSLTEGSRKFLMNKPTFDIDPLNYNLSMSNYYQPSQLQFEQNQFFSSMPCLNSSEFSDNINNNSFSKFSSPLMNIESDRDYYQMSNVINENYNKLLDPLLQF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04849 289 Gene3D - 11 67 - -
Mepo4g04849 289 Gene3D - 69 144 - -
Mepo4g04849 289 PANTHER MYB DOMAIN PROTEIN 55 1 261 - -
Mepo4g04849 289 FunFam MYB transcription factor 68 129 - -
Mepo4g04849 289 CDD SANT 70 112 IPR001005 -
Mepo4g04849 289 CDD SANT 17 61 IPR001005 -
Mepo4g04849 289 FunFam Myb transcription factor 11 67 - -
Mepo4g04849 289 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo4g04849 289 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mepo4g04849 289 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo4g04849 289 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo4g04849 289 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo4g04849 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mepo4g04849 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mepo4g04849 289 SMART sant 13 63 IPR001005 -
Mepo4g04849 289 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04849 Mepo-Chr4 57839636 57840977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04849 1 133 MYB Transcription Factor Family AT1G57560 78.195 9.60e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g04849 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04849 K09422 - tcc:18603988 302.753