Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04842 ATGGATTTCGACCAGCCCTCGTTACGTTCTAACCCTAATTCCGATGACGGAATCGATAATGAAACACCACCGTCATCCGCCGTGAATGACGGCGAAGACGTGAAACCAACGGGAAGGTTACAACGGTGGACGAGGCAGGAGATTCTGGTGCTAGTACATGGAAAGAACGATGCGGAAAGCCGGTTGAAACCGGGTCGAAACGGTTCGTTGTTTGGTTCGTTTGAGAAGAAATGGACTTTGGTTTCTTCGTACTGTGAGAAACATGGTGTGAACCGGACACCGATTCAGTGTAAGAAGCGATGGGGCAATCTCACCGCAGATTATAAGAAGATCAAGGAGTGGGAGTCTCAGGTGAGTGATGAAACGGAGTCGTTTTGGTTGATGAACGTTGAGTTGAGGAGAGAGAGGAAATTGCCTGGTTGTTTTGATAGTGAGGTTTATGATATTCTTGATTCGGCGGTGGCTGCAACGGCTATTCCGGTAGCTGTGGCTGCACCGGTTTCAGAGGTGGTTGGTGATGAGGAGGTTCATATTTATGATAGTAATAGGAAAGTGAACGGTGAAGATGAGTTGTTTTCTGATTTGGAGAAGGATGATCATGTTATTTCACCTGTTCCTATCTCAGTCTCAGAGAAGCAGTTTGTTCCACTTCTCAGTGGCTTCCAAGGAGAAGGCAATGCTCGAGGTGAACGAAAGAGGAAGCGGTTTGCAACTGAAGACAACCAAGAGGAGGAAAGTGTGCAGAGTGAATTAATTGAAGTGTTAGAGAAAAATGGCAAGATGCTATGTGAACAGCTAGAGGCTCAGAACAAGAGTTTACAGTTGGATCGCCAGCAACAGAATCAAACTGCAACTAACATGGTTGCTGTTCTTGATAAGCTTGCAAATGCTCTTGGGAGAATTGCTGATAAATTGTAG 918 0.4575 MDFDQPSLRSNPNSDDGIDNETPPSSAVNDGEDVKPTGRLQRWTRQEILVLVHGKNDAESRLKPGRNGSLFGSFEKKWTLVSSYCEKHGVNRTPIQCKKRWGNLTADYKKIKEWESQVSDETESFWLMNVELRRERKLPGCFDSEVYDILDSAVAATAIPVAVAAPVSEVVGDEEVHIYDSNRKVNGEDELFSDLEKDDHVISPVPISVSEKQFVPLLSGFQGEGNARGERKRKRFATEDNQEEESVQSELIEVLEKNGKMLCEQLEAQNKSLQLDRQQQNQTATNMVAVLDKLANALGRIADKL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04842 305 ProSiteProfiles Myb-like domain profile. 35 105 IPR001005 -
Mepo4g04842 305 MobiDBLite consensus disorder prediction 1 27 - -
Mepo4g04842 305 Coils Coil 263 283 - -
Mepo4g04842 305 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 9 305 - -
Mepo4g04842 305 Gene3D - 43 110 - -
Mepo4g04842 305 MobiDBLite consensus disorder prediction 1 39 - -
Mepo4g04842 305 SUPERFAMILY Homeodomain-like 42 110 IPR009057 -
Mepo4g04842 305 Pfam Myb/SANT-like DNA-binding domain 41 126 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04842 Mepo-Chr4 57768529 57769446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04842 42 113 Trihelix Transcription Factor Family AT1G33240 31.944 4.12e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo4g04842 Myb_DNA-bind_4 1.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04842 - - tpra:123890648 425.246