Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04825 ATGAGCAGTAGTTGTGGAAGAGAAGGTGGAGGATCAGGAGGAGCAGTGAGGCAGTATATAAGATCAAAAGTCCCACGTTTGAGATGGACTCCTGAACTTCATCGTTGCTTTGTTCATGCTATTCAAACCCTTGGTGGTCATCATAAGGCTACTCCTAAACTTGTTCTTCAGTTGATGGATATCAAAGGGCTCACTATTTCACACGTCAAGAGCCATCTTCAGATGTATAGAAGCATGAGAGGTGAATTAGGAAGACAAGGTAGGACAAGCTCCCAACATAGAAACCAATGTCTTGAAGAGCATGATGATGGATGTGTTGATGAAGTGAATGATGTTAATGTTGAGCATTCTTTGAGGAGAGAATCTGATTCTTCCTTCATTGGTCACAGTAACAACTTCTCAAAAAGAGCTAGAATCGAGAGGAGAAGTTCTACAACTAGTCTACAATGCAGCAGTGAAAGAAGAAGAATATGTGATGATGGAGTAACAAAACCGTACTGCTTTTATGACTATGTACAGCTCAATGCCAATACCAATACCAATACCATGAGTGATCAGCATGATCAGAACAAGAAAGGAATAAAGGATGAAGACCAGTTTTGTGCATGGCAGAGGCAAATTCAACCACCCAATTCAACTTTGCTACCAGATTTTGGCATAAACCTCACTTCTTTCAAATCTCTAAACCAAGAATCTGATTTCTCTCAGGCTAGTAATGTAAATGACAGAAAGAGCCCTTCATGGTCAATTAATGGACTTGTGAAAACTGACAGAGCACATGTAGAAGTTGAAGAAGTAGGAGGACATGAGTTGTCATTGTCGTTAACATTGCAAAATCCTTCACCTCAGACAAGTAATGCTTCTTATTCGGCCAGTGAAATCAGTGAGGCAATTTCATGCTGTCCTCCTTCTAACCCTGGTCCTGATGGGTTTAGCAGCTACAAGGACTGCTCTAGAATATCATCTACTGTGAATGAAAGGATTAATTTAGACCTATCTTTAGCCATTTGTGGCAATTGA 1020 0.4039 MSSSCGREGGGSGGAVRQYIRSKVPRLRWTPELHRCFVHAIQTLGGHHKATPKLVLQLMDIKGLTISHVKSHLQMYRSMRGELGRQGRTSSQHRNQCLEEHDDGCVDEVNDVNVEHSLRRESDSSFIGHSNNFSKRARIERRSSTTSLQCSSERRRICDDGVTKPYCFYDYVQLNANTNTNTMSDQHDQNKKGIKDEDQFCAWQRQIQPPNSTLLPDFGINLTSFKSLNQESDFSQASNVNDRKSPSWSINGLVKTDRAHVEVEEVGGHELSLSLTLQNPSPQTSNASYSASEISEAISCCPPSNPGPDGFSSYKDCSRISSTVNERINLDLSLAICGN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04825 339 Gene3D - 24 80 - -
Mepo4g04825 339 FunFam Myb family transcription factor 23 81 - -
Mepo4g04825 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 13 146 IPR046955 GO:0003700
Mepo4g04825 339 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Mepo4g04825 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Mepo4g04825 339 SUPERFAMILY Homeodomain-like 23 78 IPR009057 -
Mepo4g04825 339 NCBIfam myb-like DNA-binding domain, SHAQKYF class 25 78 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04825 Mepo-Chr4 57620671 57623893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04825 5 83 G2-like Transcription Factor Family AT1G14600 72.152 6.98e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo4g04825 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04825 - - tpra:123923253 449.514