Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04801 ATGGACACTTCAAATCCTGCTGCATTTGTCAATGCCCAAGTTCTTCCCAATTTCATTGGAAAGAAAGTAAGAACAGTGGTTCAGGTGAATCATTCTGATGGTGCGACAATCACGGGAAAATCCACTGATGAATCTCAGATAACTGTAAAAGGGTTATCATCTCAGGTCCCTGTCATGAATTATGTTGAGGTTATTGGCATTGCTGAAAGTAACAACTCTATCAGTGCTGATATATTGACTGACTTTGGTGCCACATTTGATGTTGACTCTTACAATCAGTTATGCCAACTGGCAAATGGTGAATGCAGAAGTCTGTTTCTTTAG 324 0.3981 MDTSNPAAFVNAQVLPNFIGKKVRTVVQVNHSDGATITGKSTDESQITVKGLSSQVPVMNYVEVIGIAESNNSISADILTDFGATFDVDSYNQLCQLANGECRSLFL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04801 107 Pfam Replication factor A protein 3 1 100 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo4g04801 107 CDD RPA3 6 99 - -
Mepo4g04801 107 Gene3D - 2 107 IPR012340 -
Mepo4g04801 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
Mepo4g04801 107 SUPERFAMILY Nucleic acid-binding proteins 5 99 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04801 Mepo-Chr4 57421878 57423219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04801 1 107 Core DNA Replication Machinery Family AT4G18590 58.879 2.25e-42 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04801 K10740 - gmx:100781484 161.77