Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04799 ATGATACGTTTTCTAGGACTTCTCTTCCGTTCATTTTTTCTTATTAGGGTTTCAATATTCAAGCCTCCGCAACAACAATATTATACGGACATGGACACTTCAAATCCTGCTGCATTTGTCAATGCCCAAGTTCTTCCCAGTTTCATTGGAAAGAAAGTAAGAGCAGTGGTTCAGGTGAATCATTCTGATGGTTCGACAATCACGGGAAAATCCACTGATGAATCTCAGATAACCGTAAAAGGGTTATCATCTCAAGTCCCTGTTATGAATTACGTGGAGGTTATTGGCATTGCTGAAAGTAACAACTCTATCCGTGCTGAAATATTGACTGACTTTGGTGCCACATTTGATGTCAACTCTTACAATCAGTTATGCCAACTAGCAAATGGTGAATTCAGAAGTCTGTTTCTTTAG 414 0.3913 MIRFLGLLFRSFFLIRVSIFKPPQQQYYTDMDTSNPAAFVNAQVLPSFIGKKVRAVVQVNHSDGSTITGKSTDESQITVKGLSSQVPVMNYVEVIGIAESNNSIRAEILTDFGATFDVNSYNQLCQLANGEFRSLFL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04799 137 SUPERFAMILY Nucleic acid-binding proteins 35 136 IPR012340 -
Mepo4g04799 137 CDD RPA3 36 136 - -
Mepo4g04799 137 Gene3D - 31 137 IPR012340 -
Mepo4g04799 137 Pfam Replication factor A protein 3 31 130 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo4g04799 137 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 27 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04799 Mepo-Chr4 57410558 57411849 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04799 31 137 Core DNA Replication Machinery Family AT4G18590 62.617 6.27e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04799 K10740 - gmx:100781484 161.384