Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04796 ATGGGATCTGAAGCTCCTATGGTTCCAGAATGGGCATCGGAAGCTTGCATAATGGGAATCGACGAAGCTGGAAGAGGTCCTGTTCTTGGTCCTATGGTCTATGGTTGTTTATACTGTCCTCGCTCCTACCAAAAAACCCTTTCTACTTTGAGTTTCGCAGATTCTAAGACACTGAAAGAAGAGAAGAGGGAAGAATTGTTTGAAACTTTGAAAGCCAACGATTCTATTGGATGGGCTGTTGATGTCATTGACCCAAAGGAACTCTCTGCCAAAATGCTCAAGAAGAATAAGATAAACTTGAATGAGATATCACATGACTCTGCCATGGGCCTCGTTGATAGGGTGCTCAAAATGGGAGTGCTTCTAACTGAGGTTTATATTGATACAGTTGGAGATCCAGGGAAATATGAAGCAAAGCTGTCTAAAAAATTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTCAGTGGTGCAAGTATAGTTGCAAAGGTCACAAGAGATCGAGCTATAAGAGATTGGGTGCTTGACGAGTCTGCTGATAACATTCACAGGAACTTTGGCTCTGGATATCCTGGAGATCCTGCAACCAAGTCTTGGCTAGAAGATCACAAACATTCTATCTTTGGTTTTCCAACATTGGTCAGGTTTAGTTGGGGAACTTGCAGCTCTTATTTTAAAGGTGGCACTGAAGTCTTATGGGAGTCTGACTTGGATGAAGACGGTGGCAACAATAATAATAATGGCAAGAGGCAATTGAAATTAAATAATTTGGGTTTCACCTCATCCAAGAGGAGAAGCGAAGAAATAGAATCAAGTGGTAAAGGGCGTTCTAGGTTTTTTCAGGCTCGGAAACTTGAGCACCTCACTCATTTCTAA 897 0.4169 MGSEAPMVPEWASEACIMGIDEAGRGPVLGPMVYGCLYCPRSYQKTLSTLSFADSKTLKEEKREELFETLKANDSIGWAVDVIDPKELSAKMLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEAKLSKKFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRAIRDWVLDESADNIHRNFGSGYPGDPATKSWLEDHKHSIFGFPTLVRFSWGTCSSYFKGGTEVLWESDLDEDGGNNNNNGKRQLKLNNLGFTSSKRRSEEIESSGKGRSRFFQARKLEHLTHF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04796 298 PANTHER RIBONUCLEASE H2 SUBUNIT A 4 285 IPR001352 GO:0003723|GO:0004523
Mepo4g04796 298 SUPERFAMILY Ribonuclease H-like 16 232 IPR012337 -
Mepo4g04796 298 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 15 237 IPR024567 GO:0004523
Mepo4g04796 298 CDD RNase_HII_eukaryota_like 18 234 - -
Mepo4g04796 298 FunFam Ribonuclease 189 235 - -
Mepo4g04796 298 FunFam Ribonuclease 2 187 - -
Mepo4g04796 298 Gene3D - 2 187 IPR036397 GO:0003676
Mepo4g04796 298 NCBIfam ribonuclease HII 17 230 IPR004649 GO:0004523|GO:0016070
Mepo4g04796 298 Gene3D Ribonuclease hii. Domain 2 188 234 IPR023160 GO:0004523
Mepo4g04796 298 Pfam Ribonuclease HII 18 228 IPR024567 GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04796 Mepo-Chr4 57396680 57400623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04796 1 298 Core DNA Replication Machinery Family AT2G25100 65.436 1.33e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04796 K10743 - gmx:100779875 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04796 4 57396680 57400623 Mepo4g04796 4 57396680 57400623 ECH