Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04787 ATGTATCGGGAGTCAGTTGCTATGGCTGCTACCACCGCCGCCACGACGCGGTGGCCGACTCAGCCAACTCAGTGGACTCGAGACCATGACAAGCTGTTCGAGCGAGCTCTGTTGTTGGTGCCGGAGGATTTGCCGGACCGGTGGGAGAAGATCGCCGAACAAGTTCCTGGTAAGTCTGCGGCGGAAATTAGGGATCACTATGAAGCTTTGGTTCATGATATACTGGAAATTGATTCGGGTCGGGTTGAGGTGCCGAGTTATTCTGATGAATCGGCTGTGAGTGGTGGTGGATTGGCTGAATGGGATTCTTCGAATCAAATTTCGTTTGGTTCGAAGCCGAGACATGGCGGTGATAACGAGAGGAAGAAAGGAACTCCATGGACTGAAGAAGAACACAGGCTGTTTCTTATTGGGCTGACCAAATTTGGGAAAGGAGATTGGAGAAGCATTTCAAGGAATGTTGTTGTGACAAGAACACCAACCCAGGTGGCTAGCCATGCTCAAAAGTACTTTCTTCGCCAGAATTCGGTGAAGAAAGAGAGGAAGAGATCAAGTATTCATGACATTACATCGGTGGACAGTAACTCAGCTCCTGTGCCTATTGATCAGAACTGGGTTCCTCCTCCTGGTAGTGGTTCAATGCAACAACAGTCTCCAGAAATGCATCATTATCCATCAAACAATTTGCAAGATCAAATGAGTGCATATGGGTATTCAAATTATGGCTATCAAATGTAA 738 0.4743 MYRESVAMAATTAATTRWPTQPTQWTRDHDKLFERALLLVPEDLPDRWEKIAEQVPGKSAAEIRDHYEALVHDILEIDSGRVEVPSYSDESAVSGGGLAEWDSSNQISFGSKPRHGGDNERKKGTPWTEEEHRLFLIGLTKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITSVDSNSAPVPIDQNWVPPPGSGSMQQQSPEMHHYPSNNLQDQMSAYGYSNYGYQM 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04787 245 SMART sant 21 73 IPR001005 -
Mepo4g04787 245 SMART sant 123 173 IPR001005 -
Mepo4g04787 245 Gene3D - 125 177 - -
Mepo4g04787 245 SUPERFAMILY Homeodomain-like 23 79 IPR009057 -
Mepo4g04787 245 FunFam transcription factor MYB1R1 125 176 - -
Mepo4g04787 245 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Mepo4g04787 245 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 21 235 IPR043363 -
Mepo4g04787 245 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Mepo4g04787 245 Pfam Myb-like DNA-binding domain 126 171 IPR001005 -
Mepo4g04787 245 CDD SANT 126 171 IPR001005 -
Mepo4g04787 245 MobiDBLite consensus disorder prediction 181 200 - -
Mepo4g04787 245 CDD SANT 25 71 IPR001005 -
Mepo4g04787 245 MobiDBLite consensus disorder prediction 93 126 - -
Mepo4g04787 245 MobiDBLite consensus disorder prediction 98 112 - -
Mepo4g04787 245 ProSiteProfiles Myb-like domain profile. 25 71 IPR001005 -
Mepo4g04787 245 SUPERFAMILY Homeodomain-like 121 176 IPR009057 -
Mepo4g04787 245 NCBIfam myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Mepo4g04787 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
Mepo4g04787 245 Gene3D - 20 84 - -
Mepo4g04787 245 FunFam Transcription factor SRM1 19 84 - -
Mepo4g04787 245 ProSiteProfiles SANT domain profile. 122 175 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04787 Mepo-Chr4 57329467 57331447 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g04787 Myb_DNA-binding 9.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04787 - - gmx:547481 387.497