Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04774 ATGGCGGTTGGTAATTCCATTGGTGTTCATGGTTTAGGAGACATGAAGAGTCTCACTGTCCAATTCATCACCGGACGGTGGTTCGTCATTTTCGCCTCCTTCCTAATCATGGCAGCTGCCGGAGCCACCTACATGTTCGGTCTATACTCCGGCGACATAAAAACAACACTTGGCTATGACCAAAGTACACTAAACCTCCTTAGTTTTTTCAAAGATTTTGGTAGCAACGTTGGTGTCCTTGCAGGACTAGTCAACGAACTCTATCCACCTTGGGTAGTTTTAACAATAGGTGCTATACTAAACTTTTTTGGTTACTTTATGATTTGGTTATCAGTCACAAAAAAAATAGCAAGACCAAAAGTTTGGCAAATGTGTCTTTACATTTGTATAGGTGCTAATTCTCAGTCTTTTGCAAACACCGGTTCACTTGTTACTTGTGTTAAGAATTTCCCTGAATCTCGCGGCGCGGTTTTGGGAATTCTTAAAGGTTATGTTGGTCTTAGTGGTGCAATCATCACACAGCTTTACTCCGCTATTTATTATGATGACACAAAGGCTTTGATTTTGTTTATTGGTTGGCTTCCTGCTGCTATTTCTTTTGCTTTTCTTCGAACCATTCGATATATGAAACCTGTTCGACAAGTTAATGAGCTTAAGGTTTTTTATAATTTCTTGTATGTTTCACTTGGTCTTGCTGCATTCTTGTTGGTTATGATTATAATCCAGAAGAAGAGTAGTTTCACACAGGGTGAGTTTGGTTTAAGTGCTGCTGTGGTTATTTTCTTGCTTTTTCTTCCACTTGTTGTTGTTTTCATTGAAGAGAACAAGATTTGGCAGAGTAAAAAACTTTCTTTGGTTGATCCTTCACCAGTGAAAATAGTAACAGAAGGTGAAACTGCAACTGAAACAGAAAAAGTCAACTCTGCTGTTTCAGCATCAGCTCCAAAAAAAGATCCAAAATGGTGGGAAGATGTGTTCAATCCACCAGCAAGAGGTGATGATTATACAATACTTCAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTGGCATGTATTTGTGGTGTTGGTGGAACTTTAACAGCAATTGATAATCTTGGTCAGATAGGAACATCACTTAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCTTTAGTAAGTATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCAGAACATTTTCTAACAAAGTACAGATTTCCTCGTCCTCTTATGCTTACTTTAACTCTCTTTGTCTCATGTGTTGGACACCTTTTGATAGCATTTGATGTGCCAGAGGGTCTCTACGTAGCTTCAGTGATTATAGGATTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCAATTATATCAGAACTTTTTGGACTAAAATATTATGCAACTTTGTATAATTTTGGAAGTGTAGCAAGTCCACTTGGATTATATGTACTTAATGTGAAGATCACTGGTCATTTGTATGACAAAGAAGCTAAGAAACAATTGGAAGCACTTGGAAAACATAGAATAGAAGGGCATGAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTATCTTTCATTATTATTACAGCTGCAACATTTTTTGGTGCTGTTGTTTCACTTATTTTGGTGGCTAGGACTAGAAAGTTTTACAAAGGTGACATATACAAGAGGTACAGAGAAGAAGCTGAAATGGTGGAGGTAAAGAACGTGGGTAAGACAGAAGAAGATGACAAAGTTGGTCAACAGCAGCATGTGGTGACAACTTAG 1785 0.3754 MAVGNSIGVHGLGDMKSLTVQFITGRWFVIFASFLIMAAAGATYMFGLYSGDIKTTLGYDQSTLNLLSFFKDFGSNVGVLAGLVNELYPPWVVLTIGAILNFFGYFMIWLSVTKKIARPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLRTIRYMKPVRQVNELKVFYNFLYVSLGLAAFLLVMIIIQKKSSFTQGEFGLSAAVVIFLLFLPLVVVFIEENKIWQSKKLSLVDPSPVKIVTEGETATETEKVNSAVSASAPKKDPKWWEDVFNPPARGDDYTILQALFSIDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTLTLFVSCVGHLLIAFDVPEGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEAKKQLEALGKHRIEGHELNCVGVDCFKLSFIIITAATFFGAVVSLILVARTRKFYKGDIYKRYREEAEMVEVKNVGKTEEDDKVGQQQHVVTT 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04774 594 Pfam Nodulin-like 26 271 IPR010658 -
Mepo4g04774 594 FunFam Nodulin family protein 337 558 - -
Mepo4g04774 594 CDD MFS_Mch1p_like 25 542 - -
Mepo4g04774 594 SUPERFAMILY MFS general substrate transporter 25 555 IPR036259 -
Mepo4g04774 594 Gene3D MFS general substrate transporter like domains 337 557 IPR036259 -
Mepo4g04774 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04774 Mepo-Chr4 57170385 57172478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04774 13 583 Nodulin-like Gene Family AT2G39210 71.062 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04774 - - pvu:PHAVU_007G024800g 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04774 4 57170385 57172478 Mepo4g04774 4 57170385 57172478 ECH
Mepo3g03377 3 43849649 43851358 Mepo4g04774 4 57170385 57172478 ECH