Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04729 ATGCCACGAGGGAGACCGCAAGGAAACCCATTAGATCTTAACAATTTGCCTGATGAATACTCTAGAGATCATGGTAAACAACTCCTTGAAGACACTGATCTACCCGGTTGCAGGAAAAAGAAAAACGGCGGGAAGGATGGAAAAGATGAGTGTGGGAAGGTCTACGAATGTAGATTCTGTTCCCTCAAGTTCTGTAAATCTCAGGCTCTTGGGGGACACATGAACCGTCACCGCCAAGAGAGGGAAACTGAGACGCTTAACCATGCACGTCAGCTAGTCTTCCGTAACGATCATAACCTTGCACCACAACCAGCTCCCTCTCACCTTGTAGGATGTTGTCCACCACCAATACCAACAGCAGGCTATATTCCAGCAAATAACATGGGAGATCAAACAATTCCTATGAGATTCCCAAGATATTTCTCAGGTTCATCTTCAACCCACATTCCACCACCACCACCACCACCACAACCATCTCAACCATATCTATACTCTTCACCTACACGCCCAGTGTCTTTCCCTACACATTTGATTCCTCAGCATCCAATGAATGAATATCATGTGGGTCACGTGATGAGTAGCAGTCACCACCAGCAATATCACAACGTGAACTATGTTGCGGGTGCAGGTGGTGGTGAGTCAAGTTACACTTGCATAGGTGCACCGGTTAGACAAGGTTTTATTCCAGGAAGTAGTGGTGGGAAGGATCATCACCAAGATATGGAAGGGACATTGAATTGGGGAAGGAGCTATTCAGGAGGAGGAGGACAGCAGCATCGTTTAGATAAAACTACTACTAATTCAGCAGCATTGATCAATCGGTTTCAAGATGGTTTCTAA 840 0.4583 MPRGRPQGNPLDLNNLPDEYSRDHGKQLLEDTDLPGCRKKKNGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHNLAPQPAPSHLVGCCPPPIPTAGYIPANNMGDQTIPMRFPRYFSGSSSTHIPPPPPPPQPSQPYLYSSPTRPVSFPTHLIPQHPMNEYHVGHVMSSSHHQQYHNVNYVAGAGGGESSYTCIGAPVRQGFIPGSSGGKDHHQDMEGTLNWGRSYSGGGGQQHRLDKTTTNSAALINRFQDGF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04729 279 MobiDBLite consensus disorder prediction 136 162 - -
Mepo4g04729 279 SUPERFAMILY beta-beta-alpha zinc fingers 53 83 IPR036236 -
Mepo4g04729 279 MobiDBLite consensus disorder prediction 17 48 - -
Mepo4g04729 279 MobiDBLite consensus disorder prediction 1 48 - -
Mepo4g04729 279 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Mepo4g04729 279 Gene3D Classic Zinc Finger 38 104 - -
Mepo4g04729 279 FunFam Zinc finger protein STAMENLESS 1 31 103 - -
Mepo4g04729 279 MobiDBLite consensus disorder prediction 147 162 - -
Mepo4g04729 279 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Mepo4g04729 279 PANTHER ZINC FINGER PROTEIN JAGGED 39 262 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04729 Mepo-Chr4 56721120 56723844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04729 7 226 C2H2 Transcription Factor Family AT1G13400 42.411 9.66e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g04729 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04729 - - aprc:113871902 342.813