Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04705 ATGGCTCCAACACTCTCACCCCTCATTCTTCTTTTCCTGCTTTCCCATTTTGTCCTCATTGTTCAATCTTCCGTAAACCCAGATTACGAACCTCTTCTAACCTTCAAAACCGGTTCAGACCCATCCAATAAGCTCACAACATGGAAAACCAACACCGACCCATGCACTTGGACCGGCGTTTCATGTGTCAAAAACCGAGTCACTCGACTCATTCTCGAAAATCTCAACCTTCAAGGCACCATTGAACCCTTAACCTCACTCACTCAGCTCCGAGTTTTGAGTCTCAAAGGAAACCGCTTTTCCGGTTCACTTCCAAACCTCTCCAACTTCACTTCCCTCAAACTTCTCTTCTTATCTCACAACCATTTCTCCGGCGAGTTTCCCTCAACAGTCACGTCACTTTTCCGTCTCTACCGTCTTGATCTATCCTACAACAATTTTTCCGGCGAGATTCCGACGATGGTGAACCGTTTGACCCATCTTCTCACACTCCGTCTCGACGAGAATAAATTCTCCGGCGTCATTCCTGAACTAAACTTTCCTGGTTTACAAGACTTCAACGTCTCCAGGAACCGTCTCTCCGGCGAGATACCGAAAACGTTATCAGGTTTCACCGGTTCATCTTTCGGGCAAAACCCGTTTCTGTGTGGAGCTCCGTTGGAGAAATGTGGAGATGAACCAAATAAACCTGGATCCGATGGTGCAATTGCTTCACCATTGGTACCAGCAACTGTTGTGTCATCATCACCCAGCACAATGCCAACAACAACAGCACCAACAAACAACAAAAGCCATGAAAAAAGAGGTTCAAAAATGAGTCCTATTGTTTTAGTAGCAATTATAGTAGGTGATGTTCTTGTTCTTGGAATAGTTTGTTTACTTCTATATTGCTATTTTTGGAAAAACTATTCATCAAAATCAAAGGACAAAAAAGGGTTGAAGCTATTTGAAAGTGAAAAGATAGTGTATTCATCAAGTCCATACCCTACACAAGGAGGGTTTGAGAGGGGTAGGATGGTATTTTTTGAAGGTGAGAAAAGGTTTGAGCTTGAGGATTTGTTACGTGCTTCAGCTGAAATGCTAGGGAAAGGTGGATTTGGAACTGCTTATAAAGCTGTTCTTGATGATGGAAATGTTGTTGCTGTGAAGAGATTGAAAGATGCACAGATTGCTGGGAAGAGGGAATTTGAACAGCATATGGAAATTCTTGGAAGGATTAGGCACCCTAATGTTGTTAGTTTAAGGGCTTATTATTTTGCTAGAGATGAGAAGCTTTTGGTTTATGATTACATGCCTAATGCTACTTTGTTCTGGCTCCTTCATGGAAACAGGGGACCTGGAAGAACCCCACTGGATTGGACCACAAGACTCAAGATAGCAGCTGGAGCTGCACAAGGCGTTGCATTCATTCATAACTCATGCAAGTCCCTCAAACTCACTCATGGTAACATCAAATCCACCAACATACTCCTTGACAAGCAAGGAGATGCACGCGTTTCGGATTTTGGGCTTTCAGTCTTCAACGGTTCAAGCCCATCAGGAGCTGGTAGCAGATCAAATGGCTACCGTGCTCCTGAGGTATTGGATGGTCGAAAACAATCCCAAAAATCTGATGTCTACTCTTTTGGTGTTCTGTTGCTAGAAATGCTTACAGGGAAGTGTCCCTCTGCTGTGGAGAGTGGTGGAAGTGGTTATAATGGTGGGGTGATTGATCTACCTAGGTGGGTGCAATCAGTAGTTAGAGAGGAATGGACTGCTGAGGTTTTTGATTTGGAGTTGATGAGGTATAAAGATATTGAAGAGGAAATGGTGGGGTTGCTTCAGATTGCTATGTCTTGTACTGCTGCTTCACCTGATCAACGGCCGAGAATGTCACACGTTGTTAAGATGATTGAGGAATTGCGTGGCGTTGAGGTGTCACCCTGTCATGACACGGTGGATTCTGTCTCTGACTCGCCTTCTTTGTCTGAAGATGCTTGTGCTGGTACTACTAGTCAGTAA 2001 0.4408 MAPTLSPLILLFLLSHFVLIVQSSVNPDYEPLLTFKTGSDPSNKLTTWKTNTDPCTWTGVSCVKNRVTRLILENLNLQGTIEPLTSLTQLRVLSLKGNRFSGSLPNLSNFTSLKLLFLSHNHFSGEFPSTVTSLFRLYRLDLSYNNFSGEIPTMVNRLTHLLTLRLDENKFSGVIPELNFPGLQDFNVSRNRLSGEIPKTLSGFTGSSFGQNPFLCGAPLEKCGDEPNKPGSDGAIASPLVPATVVSSSPSTMPTTTAPTNNKSHEKRGSKMSPIVLVAIIVGDVLVLGIVCLLLYCYFWKNYSSKSKDKKGLKLFESEKIVYSSSPYPTQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIAGKREFEQHMEILGRIRHPNVVSLRAYYFARDEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAAQGVAFIHNSCKSLKLTHGNIKSTNILLDKQGDARVSDFGLSVFNGSSPSGAGSRSNGYRAPEVLDGRKQSQKSDVYSFGVLLLEMLTGKCPSAVESGGSGYNGGVIDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMSCTAASPDQRPRMSHVVKMIEELRGVEVSPCHDTVDSVSDSPSLSEDACAGTTSQ 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04705 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 636 IPR046959 -
Mepo4g04705 666 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Mepo4g04705 666 Gene3D Phosphorylase Kinase; domain 1 335 430 - -
Mepo4g04705 666 CDD STKc_IRAK 361 634 - -
Mepo4g04705 666 FunFam pollen receptor-like kinase 1 328 430 - -
Mepo4g04705 666 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 431 641 - -
Mepo4g04705 666 SUPERFAMILY Protein kinase-like (PK-like) 359 631 IPR011009 -
Mepo4g04705 666 FunFam Leucine-rich repeat receptor-like protein kinase 25 177 - -
Mepo4g04705 666 MobiDBLite consensus disorder prediction 645 666 - -
Mepo4g04705 666 MobiDBLite consensus disorder prediction 245 263 - -
Mepo4g04705 666 Pfam Protein kinase domain 359 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04705 666 SUPERFAMILY L domain-like 43 221 - -
Mepo4g04705 666 Gene3D Ribonuclease Inhibitor 85 230 IPR032675 -
Mepo4g04705 666 Gene3D Ribonuclease Inhibitor 24 84 IPR032675 -
Mepo4g04705 666 Gene3D Transferase(Phosphotransferase) domain 1 431 649 - -
Mepo4g04705 666 MobiDBLite consensus disorder prediction 245 267 - -
Mepo4g04705 666 ProSiteProfiles Protein kinase domain profile. 355 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04705 666 MobiDBLite consensus disorder prediction 642 666 - -
Mepo4g04705 666 ProSitePatterns Protein kinases ATP-binding region signature. 361 393 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04705 Mepo-Chr4 56507703 56510987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04705 28 666 Receptor kinase-like Gene Family AT1G68400 65.802 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo4g04705 Pkinase 6.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04705 - - cam:105851082 1085.48